From 96c92de9db634de72a509004fddabe1744972524 Mon Sep 17 00:00:00 2001 From: Dennis Whitlow Date: Fri, 7 Jun 2024 13:03:53 -0700 Subject: [PATCH 1/7] Fix import issues and dependency installs. --- poetry.lock | 26 ++++++++++++++++++-------- pyproject.toml | 2 ++ src/munge/base.py | 5 +++-- src/munge/codec/toml_toml.py | 3 ++- src/munge/codec/toml_tomlkit.py | 3 ++- src/munge/config.py | 8 +++++--- 6 files changed, 32 insertions(+), 15 deletions(-) diff --git a/poetry.lock b/poetry.lock index 31b67f9..b5f0ef9 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand. [[package]] name = "black" @@ -517,6 +517,16 @@ files = [ {file = "MarkupSafe-2.1.3-cp311-cp311-musllinux_1_1_x86_64.whl", hash = "sha256:5bbe06f8eeafd38e5d0a4894ffec89378b6c6a625ff57e3028921f8ff59318ac"}, {file = "MarkupSafe-2.1.3-cp311-cp311-win32.whl", hash = "sha256:dd15ff04ffd7e05ffcb7fe79f1b98041b8ea30ae9234aed2a9168b5797c3effb"}, {file = "MarkupSafe-2.1.3-cp311-cp311-win_amd64.whl", hash = "sha256:134da1eca9ec0ae528110ccc9e48041e0828d79f24121a1a146161103c76e686"}, + {file = "MarkupSafe-2.1.3-cp312-cp312-macosx_10_9_universal2.whl", hash = "sha256:f698de3fd0c4e6972b92290a45bd9b1536bffe8c6759c62471efaa8acb4c37bc"}, + {file = "MarkupSafe-2.1.3-cp312-cp312-macosx_10_9_x86_64.whl", hash = "sha256:aa57bd9cf8ae831a362185ee444e15a93ecb2e344c8e52e4d721ea3ab6ef1823"}, + {file = "MarkupSafe-2.1.3-cp312-cp312-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:ffcc3f7c66b5f5b7931a5aa68fc9cecc51e685ef90282f4a82f0f5e9b704ad11"}, + {file = 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= [ [[package]] name = "tomlkit" -version = "0.11.8" +version = "0.7.2" description = "Style preserving TOML library" -optional = true -python-versions = ">=3.7" +optional = false +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" files = [ - {file = "tomlkit-0.11.8-py3-none-any.whl", hash = "sha256:8c726c4c202bdb148667835f68d68780b9a003a9ec34167b6c673b38eff2a171"}, - {file = "tomlkit-0.11.8.tar.gz", hash = "sha256:9330fc7faa1db67b541b28e62018c17d20be733177d290a13b24c62d1614e0c3"}, + {file = "tomlkit-0.7.2-py2.py3-none-any.whl", hash = "sha256:173ad840fa5d2aac140528ca1933c29791b79a374a0861a80347f42ec9328117"}, + {file = "tomlkit-0.7.2.tar.gz", hash = "sha256:d7a454f319a7e9bd2e249f239168729327e4dd2d27b17dc68be264ad1ce36754"}, ] [[package]] @@ -1201,4 +1211,4 @@ yaml = ["PyYAML"] [metadata] lock-version = "2.0" python-versions = "^3.8" -content-hash = "a005e96882c2d7ebb35a08bc0341083875243302564964299162b0d59461c83a" +content-hash = "09a53ab62095bdd300563b1f59d01c1f9f4f7f474daee060dc0643f0972c35ab" diff --git a/pyproject.toml b/pyproject.toml index b36047a..dc5b999 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -44,6 +44,8 @@ pytest-filedata = "^0.4.0" pytest-cov = "*" tox = ">=3.20" tox-gh-actions = "^2.9.1" +toml = "^0.10.2" +tomlkit = "^0.7.2" # linting black = ">=20" diff --git a/src/munge/base.py b/src/munge/base.py index 5f70168..5662070 100644 --- a/src/munge/base.py +++ b/src/munge/base.py @@ -1,6 +1,7 @@ -import collections + import sys from urllib.parse import urlsplit +from collections.abc import Mapping import requests @@ -48,7 +49,7 @@ def set_type(self, name, typ): raise NotImplementedError("set_type has not been implemented") def supports_data(self, data): - if isinstance(data, collections.abc.Mapping): + if isinstance(data, Mapping): return self.supports_dict if isinstance(data, list): return self.supports_list diff --git a/src/munge/codec/toml_toml.py b/src/munge/codec/toml_toml.py index 013c6e1..f00799d 100644 --- a/src/munge/codec/toml_toml.py +++ b/src/munge/codec/toml_toml.py @@ -23,5 +23,6 @@ def dump(self, data, fobj, **kwargs): def dumps(self, data): return toml.dumps(data) -except ImportError: +except ImportError as e: + print(f"failed to import toml module: {e}") pass diff --git a/src/munge/codec/toml_tomlkit.py b/src/munge/codec/toml_tomlkit.py index 9f3c49b..531379d 100644 --- a/src/munge/codec/toml_tomlkit.py +++ b/src/munge/codec/toml_tomlkit.py @@ -24,5 +24,6 @@ def dump(self, data, fobj, **kwargs): def dumps(self, data, **kwargs): return tomlkit.dumps(data) -except ImportError: +except ImportError as e: + print(f"failed to import tomlkit module: {e}") pass diff --git a/src/munge/config.py b/src/munge/config.py index fd1d12d..bb0dd52 100644 --- a/src/munge/config.py +++ b/src/munge/config.py @@ -1,7 +1,9 @@ -import collections + import copy import os from urllib.parse import urlsplit +from collections.abc import MutableMapping +from collections import namedtuple import munge import munge.util @@ -10,7 +12,7 @@ # this wouldn't work with tabular data # need metaclass to allow users to set info once on class # TODO rename to BaseConfig, set standard setup for Config? -class Config(collections.abc.MutableMapping): +class Config(MutableMapping): """ class for storing and manipulating data for config files """ @@ -196,7 +198,7 @@ def find_cls(name, extra_schemes={}): return munge.get_codec(name) -class MungeURL(collections.namedtuple("MungeURL", "cls url")): +class MungeURL(namedtuple("MungeURL", "cls url")): pass From 8dc002601264cb9229d151a8970379503f51ebf8 Mon Sep 17 00:00:00 2001 From: Dennis Whitlow Date: Tue, 11 Jun 2024 11:04:39 -0700 Subject: [PATCH 2/7] Linting --- src/munge/base.py | 3 +-- src/munge/config.py | 5 ++--- 2 files changed, 3 insertions(+), 5 deletions(-) diff --git a/src/munge/base.py b/src/munge/base.py index 5662070..6d42129 100644 --- a/src/munge/base.py +++ b/src/munge/base.py @@ -1,7 +1,6 @@ - import sys -from urllib.parse import urlsplit from collections.abc import Mapping +from urllib.parse import urlsplit import requests diff --git a/src/munge/config.py b/src/munge/config.py index bb0dd52..e48a8da 100644 --- a/src/munge/config.py +++ b/src/munge/config.py @@ -1,9 +1,8 @@ - import copy import os -from urllib.parse import urlsplit -from collections.abc import MutableMapping from collections import namedtuple +from collections.abc import MutableMapping +from urllib.parse import urlsplit import munge import munge.util From c90251ae3c9c6e0a7c20de4dd37f39dbd415c939 Mon Sep 17 00:00:00 2001 From: Dennis Whitlow Date: Tue, 18 Jun 2024 01:24:24 -0700 Subject: [PATCH 3/7] change PyYaml version to 6.0.1 to support python 3.12 --- poetry.lock | 95 ++++++++++++++++++++++++++++---------------------- pyproject.toml | 2 +- 2 files changed, 54 insertions(+), 43 deletions(-) diff --git a/poetry.lock b/poetry.lock index b5f0ef9..9461ef9 100644 --- a/poetry.lock +++ b/poetry.lock @@ -886,51 +886,62 @@ 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tests run: poetry run tox -e py - name: Upload coverage - uses: codecov/codecov-action@v3 + uses: codecov/codecov-action@v4 with: + token: ${{ secrets.CODECOV_TOKEN }} fail_ci_if_error: true diff --git a/tox.ini b/tox.ini index 3fe68be..e509328 100644 --- a/tox.ini +++ b/tox.ini @@ -20,6 +20,7 @@ python = 3.9: py39 3.10: py310 3.11: py311 + 3.12: py312 [pytest] @@ -34,7 +35,7 @@ commands = [tox] -envlist = py38,py39,py310,py311 +envlist = py38,py39,py310,py311,py312 isolated_build = True From b4efbc63d6cb5ff290f576bf1ab3fa28cf80f464 Mon Sep 17 00:00:00 2001 From: Matt Griswold Date: Sat, 6 Jul 2024 13:45:23 -0500 Subject: [PATCH 5/7] update changelog --- CHANGELOG.yaml | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/CHANGELOG.yaml b/CHANGELOG.yaml index afc461c..c4f9f77 100644 --- a/CHANGELOG.yaml +++ b/CHANGELOG.yaml @@ -1,6 +1,8 @@ Unreleased: - added: [] - fixed: [] + added: + - support for py3.12 + fixed: + - finding data file in tests changed: [] deprecated: [] removed: [] From 7b5e916d43d1c9b4e43cc0e3c90afd7f53c09a4e Mon Sep 17 00:00:00 2001 From: Matt Griswold Date: Sat, 6 Jul 2024 14:36:19 -0500 Subject: [PATCH 6/7] update linter, format --- .pre-commit-config.yaml | 33 +- poetry.lock | 1111 ++++++++++++++++++--------------------- pyproject.toml | 12 +- src/munge/__init__.py | 2 +- src/munge/codec/all.py | 2 +- src/munge/config.py | 2 +- src/munge/util.py | 4 +- tests/test_cli.py | 2 - tests/test_codecs.py | 4 +- tests/test_config.py | 8 +- tests/test_globals.py | 1 - tests/test_util.py | 4 - tox.ini | 2 +- 13 files changed, 545 insertions(+), 642 deletions(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index b6fd5dc..07f1af5 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,33 +1,28 @@ fail_fast: false exclude: | - (?x)^( - tests/data/.* - )$ + (?x)^( + tests/data/.* + )$ repos: - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.4.0 + rev: v4.5.0 hooks: - id: 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(>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"] +doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] +test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] [extras] toml = ["toml"] @@ -1222,4 +1141,4 @@ yaml = ["PyYAML"] [metadata] lock-version = "2.0" python-versions = "^3.8" -content-hash = "7779b14e7501a04939f08c982d66bc359ce8896e352e94b934769149be53e67f" +content-hash = "8d49c5ccb66c5068708a61d2902ce13d84088bfa8257f3e4aacdde94d3fcff98" diff --git a/pyproject.toml b/pyproject.toml index fbe2395..5ae34de 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -40,20 +40,18 @@ click = ">=5.1" coverage = ">=5" pytest = ">=6" pytest-django = ">=3.8" -pytest-filedata = "^0.4.0" +pytest-filedata = ">=1" pytest-cov = "*" tox = ">=3.20" -tox-gh-actions = "^2.9.1" -toml = "^0.10.2" -tomlkit = "^0.7.2" +tox-gh-actions = ">=2.9.1" +toml = ">=0.10.2" +tomlkit = ">=0.7.2" # linting -black = ">=20" -isort = ">=5.7" -flake8 = ">=3.8" mypy = ">=0.950" pre-commit = ">=2.13" pyupgrade = ">=2.19" +ruff = ">=0.1" # docs markdown = "*" diff --git a/src/munge/__init__.py b/src/munge/__init__.py index 13812b7..bd25c26 100644 --- a/src/munge/__init__.py +++ b/src/munge/__init__.py @@ -3,7 +3,7 @@ from .codec import get_codec # noqa from .codec import get_codecs # noqa from .codec import load_datafile # noqa -from .config import Config +from .config import Config # noqa if not globals().get("MUNGE_EXPLICIT_IMPORT", False): from .codec import all # noqa diff --git a/src/munge/codec/all.py b/src/munge/codec/all.py index 6f7ccb8..0ad1728 100644 --- a/src/munge/codec/all.py +++ b/src/munge/codec/all.py @@ -1,4 +1,4 @@ # import munge.codec.all # loads and registers all codecs without polluting namespace -from . import * +from . import * # noqa diff --git a/src/munge/config.py b/src/munge/config.py index e48a8da..c1310b0 100644 --- a/src/munge/config.py +++ b/src/munge/config.py @@ -155,7 +155,7 @@ def try_read(self, config_dir=None, **kwargs): self.read(cdir, **kwargs) return cdir - except OSError as e: + except OSError: pass def write(self, config_dir=None, config_name=None, codec=None): diff --git a/src/munge/util.py b/src/munge/util.py index bf7fbfe..6827a9a 100644 --- a/src/munge/util.py +++ b/src/munge/util.py @@ -19,8 +19,8 @@ def recursive_update(a, b, **kwargs): recursive_update(a[k], v, **kwargs) continue - elif merge_lists and type(v) is list: - if type(a.get(k, None)) is list: + elif merge_lists and isinstance(v, list): + if isinstance(a.get(k, None), list): if copy: a[k].extend(deepcopy(v)) else: diff --git a/tests/test_cli.py b/tests/test_cli.py index d660dac..ca4c7ec 100644 --- a/tests/test_cli.py +++ b/tests/test_cli.py @@ -1,7 +1,5 @@ import os -import click -import pytest from click.testing import CliRunner import munge.cli diff --git a/tests/test_codecs.py b/tests/test_codecs.py index 6bb34c5..a45bbe4 100644 --- a/tests/test_codecs.py +++ b/tests/test_codecs.py @@ -1,5 +1,4 @@ import collections -import filecmp import os import sys @@ -179,6 +178,7 @@ def test_dumpu(codec, dataset, tmpdir): if not obj.supports_data(dataset.expected): return dstfile = tmpdir.join("dump" + obj.extension) + assert dstfile assert dataset.expected == obj.loads(obj.dumps(dataset.expected)) @@ -216,7 +216,7 @@ def test_load_datafile(codec, dataset): munge.load_datafile("nonexistant", data_dir) # default value - assert None == munge.load_datafile("nonexistant", data_dir, default=None) + assert munge.load_datafile("nonexistant", data_dir, default=None) is None assert "DEFAULT" == munge.load_datafile("nonexistant", data_dir, default="DEFAULT") data = munge.load_datafile(dataset.filename, this_dir) diff --git a/tests/test_config.py b/tests/test_config.py index 6781609..2bc453d 100644 --- a/tests/test_config.py +++ b/tests/test_config.py @@ -1,9 +1,5 @@ -import collections -import copy -import filecmp import os import shutil -import sys import pytest @@ -18,6 +14,7 @@ def test_parse_url(): mysql = munge.get_codec("mysql") + assert mysql json = munge.get_codec("json") toml = munge.get_codec("toml") @@ -123,6 +120,7 @@ def conf0(request): def test_derived_config_obj(conf): assert default_config == conf.default() baseconf = munge.config.Config(**DefaultConfig.defaults) + assert baseconf def test_config_obj(conf): @@ -272,4 +270,4 @@ def test_conf0(conf0): assert conf0_data["addrbook"]["site0"]["url"] == conf0.get_nested( "addrbook", "site0", "url" ) - assert None == conf0.get_nested("addrbook", "site1", "url") + assert conf0.get_nested("addrbook", "site1", "url") is None diff --git a/tests/test_globals.py b/tests/test_globals.py index 69b4e5a..156142b 100644 --- a/tests/test_globals.py +++ b/tests/test_globals.py @@ -1,4 +1,3 @@ -import importlib import os import sys diff --git a/tests/test_util.py b/tests/test_util.py index 25c2fe5..8f5ba39 100644 --- a/tests/test_util.py +++ b/tests/test_util.py @@ -1,7 +1,3 @@ -import copy - -import pytest - import munge.util diff --git a/tox.ini b/tox.ini index e509328..c4fbc0b 100644 --- a/tox.ini +++ b/tox.ini @@ -28,7 +28,7 @@ norecursedirs = .ctl .tox .venv data gen [testenv] -whitelist_externals = poetry +allowlist_externals = poetry commands = poetry install -v --all-extras poetry run pytest -vv --cov="{toxinidir}/src" --cov-report=term-missing --cov-report=xml tests/ From ce7dbb36e0f3c46f7a5b3b153350127c254bf602 Mon Sep 17 00:00:00 2001 From: Matt Griswold Date: Sat, 6 Jul 2024 14:41:23 -0500 Subject: [PATCH 7/7] update pre-commit --- .pre-commit-config.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 07f1af5..0c9ba4f 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -5,13 +5,13 @@ exclude: | )$ repos: - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.5.0 + rev: v4.6.0 hooks: - id: check-yaml - id: trailing-whitespace - repo: https://github.com/astral-sh/ruff-pre-commit # Ruff version. - rev: v0.1.14 + rev: v0.5.1 hooks: # Run the linter. - id: ruff