From ff6a2fbf5aec66390dcabf6a97623b4e784d2d92 Mon Sep 17 00:00:00 2001 From: Romain Beucher Date: Thu, 8 Feb 2024 11:36:15 +1100 Subject: [PATCH 1/2] Update --- environments/access-med/config.sh | 1 + 1 file changed, 1 insertion(+) diff --git a/environments/access-med/config.sh b/environments/access-med/config.sh index a260a01..fca0abb 100644 --- a/environments/access-med/config.sh +++ b/environments/access-med/config.sh @@ -7,6 +7,7 @@ ### outside_commands_to_include ### outside_files_to_copy + ### Optional config for custom deploy script export VERSION_TO_MODIFY=0.4 export STABLE_VERSION=0.3 From 7687531d18686f80c127f9301257eb0d71c7bb37 Mon Sep 17 00:00:00 2001 From: Romain Beucher Date: Thu, 8 Feb 2024 11:43:26 +1100 Subject: [PATCH 2/2] Update --- .github/workflows/build.yml | 2 +- .github/workflows/test.yml | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index e3fccc6..312ab15 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -22,4 +22,4 @@ jobs: eval $( grep ADMIN_DIR $SCRIPT_DIR/install_config.sh ) eval $( grep JOB_LOG_DIR $SCRIPT_DIR/install_config.sh ) cd $JOB_LOG_DIR - qsub -N build_${{ inputs.environment }} -lncpus=1,mem=20GB,walltime=2:00:00,jobfs=50GB,storage=gdata/xp65+scratch/tm70+gdata/hh5+scratch/hh5 -v SCRIPT_DIR,CONDA_ENVIRONMENT=${{ inputs.environment }} -P iq82 -q copyq -Wblock=true -Wumask=037 "${SCRIPT_DIR}"/build.sh + qsub -N build_${{ inputs.environment }} -lncpus=1,mem=20GB,walltime=2:00:00,jobfs=50GB,storage=gdata/xp65+scratch/iq82+gdata/hh5+scratch/hh5 -v SCRIPT_DIR,CONDA_ENVIRONMENT=${{ inputs.environment }} -P iq82 -q copyq -Wblock=true -Wumask=037 "${SCRIPT_DIR}"/build.sh diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index 31e6f17..41ee15c 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -21,4 +21,4 @@ jobs: eval $( grep ADMIN_DIR $SCRIPT_DIR/install_config.sh ) eval $( grep JOB_LOG_DIR $SCRIPT_DIR/install_config.sh ) cd $JOB_LOG_DIR - qsub -N test_${{ inputs.environment }} -lncpus=4,mem=20GB,walltime=0:20:00,jobfs=50GB,storage=gdata/xp65+scratch/tm70+gdata/hh5+scratch/hh5 -v SCRIPT_DIR,CONDA_ENVIRONMENT=${{ inputs.environment }} -P iq82 -Wblock=true -Wumask=037 "${SCRIPT_DIR}"/test.sh \ No newline at end of file + qsub -N test_${{ inputs.environment }} -lncpus=4,mem=20GB,walltime=0:20:00,jobfs=50GB,storage=gdata/xp65+scratch/iq82+gdata/hh5+scratch/hh5 -v SCRIPT_DIR,CONDA_ENVIRONMENT=${{ inputs.environment }} -P iq82 -Wblock=true -Wumask=037 "${SCRIPT_DIR}"/test.sh \ No newline at end of file