diff --git a/CHANGELOG.md b/CHANGELOG.md index 9823652959..4bde64a0b1 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -2,6 +2,41 @@ ## v0.X Series +### v0.11.28 (2022-04-08) + +New features: +* Added `Solver.setSteadyStateToleranceFactor` and + `Solver.setSteadyStateSensiToleranceFactor` to specify a steady state + tolerance factor by @dilpath in https://github.com/AMICI-dev/AMICI/pull/1758 + + **NOTE: This also relaxed the default steady state (sensitivity)** + **tolerances by a factor of 100.** +* Added support for `pathlib.Path` by @dweindl in + https://github.com/AMICI-dev/AMICI/pull/1769 +* Allow specifying initial timepoint with `ExpData` by @dilpath in + https://github.com/AMICI-dev/AMICI/pull/1776 + +Performance: +* Speedup for models with conservation laws by @FFroehlich in + https://github.com/AMICI-dev/AMICI/pull/1765 +* Improved efficiency of newton step convergence check by @FFroehlich in + https://github.com/AMICI-dev/AMICI/pull/1775 + +Fixes: +* Fixed deprecation warning for pandas.DataFrame.append in + `rdatas_to_measurement_df` by @dweindl in + https://github.com/AMICI-dev/AMICI/pull/1770 +* Fixed Rule-target handling in PEtab import by @dweindl in + https://github.com/AMICI-dev/AMICI/pull/1753 + +Removed functionality: +* Removed long deprecated `sbml2amici` arguments `modelName` + and `constantParameters` by @dweindl in + https://github.com/AMICI-dev/AMICI/pull/1774 + +**Full Changelog**: +https://github.com/AMICI-dev/AMICI/compare/v0.11.27...v0.11.28 + ### v0.11.27 (2022-04-04) New features: @@ -24,7 +59,6 @@ Performance: * Optional parallel computation of derivatives during model import by @dweindl in https://github.com/AMICI-dev/AMICI/pull/1740 * Sparsify jacobian by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/1766 -* Speedup for models with conservation laws by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/1765 * Speedup conservation law computation by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/1754 * Exploit stoichiometric matrix in pysb import by @FFroehlich in diff --git a/version.txt b/version.txt index 7d7d637254..2b71711fca 100644 --- a/version.txt +++ b/version.txt @@ -1 +1 @@ -0.11.27 +0.11.28