update to 22.10

AMReX-Astro · Oct 1, 2022 · 99a0d33 · 99a0d33
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diff --git a/external/Microphysics b/external/Microphysics
diff --git a/external/amrex b/external/amrex
+8 −0		.zenodo.json
+39 −19		CHANGES.md
+3 −0		EOS/primordial_chem/Make.package
+47 −0		EOS/primordial_chem/_parameters
+351 −0		EOS/primordial_chem/actual_eos.H
+10 −0		EOS/primordial_chem/actual_eos_data.H
+3 −0		EOS/primordial_chem/actual_eos_data.cpp
+71 −0		EOS/primordial_chem/eos_composition.H
+7 −3		Make.Microphysics_extern
+1 −0		integration/ForwardEuler/actual_integrator.H
+3 −0		integration/VODE/_parameters
+1 −0		integration/VODE/actual_integrator.H
+1 −0		integration/VODE/actual_integrator_simplified_sdc.H
+25 −0		integration/VODE/vode_rhs_simplified_sdc.H
+7 −6		integration/VODE/vode_type_simplified_sdc.H
+4 −2		integration/VODE/vode_type_strang.H
+1 −1		interfaces/burn_type.H
+17 −0		networks/partition_test/Make.package
+1 −0		networks/partition_test/NETWORK_PROPERTIES
+2 −0		networks/partition_test/_parameters
+60 −0		networks/partition_test/actual_network.H
+34 −0		networks/partition_test/actual_network_data.cpp
+376 −0		networks/partition_test/actual_rhs.H
+31 −0		networks/partition_test/inputs.burn_cell.VODE
+20 −0		networks/partition_test/part_test.py
+254 −0		networks/partition_test/partition_functions.H
+5 −0		networks/partition_test/pynucastro.net
+360 −0		networks/partition_test/reaclib_rates.H
+327 −0		networks/partition_test/table_rates.H
+23 −0		networks/partition_test/table_rates_data.cpp
+34 −0		networks/partition_test/tfactors.H
+4 −0		networks/subch_approx/actual_rhs.H
+11 −0		networks/subch_approx/reaclib_rates.H
+4 −0		networks/subch_simple/actual_rhs.H
+11 −0		networks/subch_simple/reaclib_rates.H
+3 −0		nse/Make.package
+3 −0		nse/_parameters
+326 −99		nse/actual_nse.H
+49 −0		nse/make_table/GNUmakefile
+2 −0		nse/make_table/Make.package
+6 −0		nse/make_table/README.md
+16 −0		nse/make_table/_parameters
+67 −0		nse/make_table/burn_cell.H
+36 −0		nse/make_table/main.cpp
+20 −0		nse/nse_index.H
+9 −0		nse/nse_index.cpp
+6 −0		screening/screen.H
+5 −0		sphinx_docs/source/screening.rst
+1 −1		unit_test/burn_cell/_parameters
+27 −5		unit_test/burn_cell/burn_cell.H
+26 −13		unit_test/burn_cell/ecsn_unit_test.out
+12 −5		unit_test/burn_cell/inputs_subch_compare
+74 −50		unit_test/burn_cell/subch_approx_unit_test.out
+1 −1		unit_test/test_nse/Make.package
+4 −6		unit_test/test_nse/README.md
+1 −0		unit_test/test_nse/_parameters
+2 −0		unit_test/test_nse/inputs_aprox13
+3 −1		unit_test/test_nse/inputs_aprox19
+3 −1		unit_test/test_nse/inputs_aprox21
+3 −0		unit_test/test_nse/inputs_iso7
+4 −1		unit_test/test_nse/inputs_subch2
+5 −10		unit_test/test_nse/main.cpp
+20 −13		unit_test/test_nse/nse_example.H
+48 −0		unit_test/test_part_func/GNUmakefile
+2 −0		unit_test/test_part_func/Make.package
+8 −0		unit_test/test_part_func/_parameters
+34 −0		unit_test/test_part_func/main.cpp
+32 −0		unit_test/test_part_func/pf_cell.H
+13 −3		unit_test/test_react/main.cpp
+1 −0		unit_test/test_react/react_zones.H
+10 −0		util/hybrj/Make.package
+6 −0		util/hybrj/README.md
+374 −0		util/hybrj/hybrj.H
+402 −0		util/hybrj/hybrj.H.hack
+167 −0		util/hybrj/hybrj_dogleg.H
+96 −0		util/hybrj/hybrj_enorm.H
+58 −0		util/hybrj/hybrj_qform.H
+117 −0		util/hybrj/hybrj_qrfac.H
+146 −0		util/hybrj/hybrj_r1mpyq.H
+197 −0		util/hybrj/hybrj_r1updt.H
+117 −0		util/hybrj/hybrj_type.H
+49 −0		util/hybrj/test/GNUmakefile
+1 −0		util/hybrj/test/Make.package
+70 −0		util/hybrj/test/main.cpp
+44 −0		CHANGES
+1 −1		Docs/sphinx_documentation/source/SWFFT.rst
+180 −40		Src/AmrCore/AMReX_ErrorList.cpp
+48 −0		Src/AmrCore/AMReX_Interp_C.H
+69 −0		Src/AmrCore/AMReX_Interpolater.H
+93 −0		Src/AmrCore/AMReX_Interpolater.cpp
+52 −1		Src/Base/AMReX_Algorithm.H
+49 −0		Src/Base/AMReX_Array4.H
+12 −0		Src/Base/AMReX_MultiFabUtil.H
+154 −0		Src/Base/AMReX_MultiFabUtil.cpp
+0 −2		Src/Base/AMReX_VisMF.H
+1 −0		Src/LinearSolvers/MLMG/AMReX_MLEBNodeFDLaplacian.H
+0 −4		Src/Particle/AMReX_ParticleInit.H
+19 −1		Src/Particle/AMReX_WriteBinaryParticleData.H