diff --git a/tools/repenrich2/macros.xml b/tools/repenrich2/macros.xml index 2165666b..b395fc6d 100644 --- a/tools/repenrich2/macros.xml +++ b/tools/repenrich2/macros.xml @@ -1,6 +1,6 @@ 2.31.1 - 2 + 3 23.0 diff --git a/tools/repenrich2/repenrich2.xml b/tools/repenrich2/repenrich2.xml index 009597c6..d9988feb 100644 --- a/tools/repenrich2/repenrich2.xml +++ b/tools/repenrich2/repenrich2.xml @@ -25,7 +25,7 @@ ln -s -f '$refGenomeSource.genome' 'genome.fa' && #set index_path = 'genome' #else: - #set index_path = $refGenomeSource.index.fields.path + #set index_path = $refGenomeSource.genome.fields.path bowtie-inspect $index_path > genome.fa && #end if