conferences.bib

@inproceedings{GrayEtal:bioschemas-idpkg:swat4hcls2022,
  abstract  = {There are many data sources containing overlapping information about Intrinsically Disordered Proteins (IDP). IDPcentral aims to be a registry to aid the discovery of data about proteins known to be intrinsically disordered by aggregating the content from these sources. Traditional ETL approaches for populating IDPcentral require the API and data model of each source to be wrapped and then transformed into a common model.

In this paper, we investigate using Bioschemas markup as a mechanism to populate the IDPcentral registry by constructing the Intrinsically Disordered Protein Knowledge Graph (IDP-KG). Bioschemas markup is a machine-readable, lightweight representation of the content of each page in the site that is embedded in the HTML. For any site it is accessible through a HTTP request. We harvest the Bioschemas markup in three IDP sources and show the resulting IDP-KG has the same breadth of proteins available as the original sources, and can be used to gain deeper insight into their content by querying them as a single, consolidated knowledge graph.},
  author    = {Alasdair J. G. Gray and
               Petros Papadopoulos and
               Imran Asif and
               Ivan Micetic and
               Andr{\'{a}}s Hatos},
  title     = {Creating and Exploiting the Intrinsically Disordered Protein Knowledge Graph {(IDP-KG)}},
  booktitle = {13th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences, {SWAT4HCLS} 2022, Virtual Event, Leiden, The Netherlands, January 10th to 14th, 2022},
  series    = {{CEUR} Workshop Proceedings},
  volume    = {3127},
  pages     = {1--10},
  publisher = {CEUR-WS.org},
  year      = {2022},
  url       = {http://ceur-ws.org/Vol-3127/paper-1.pdf}
}

@inproceedings{Hua:properties-name:MISNC2021,
author = {Zhao, Hua and Kamareddine, Fairouz and Gray, Alasdair J G and Zantout, Hind},
title = {A Novel Method That Identifies The Hidden Properties Of A Person’s Name In Kanji Or Hanzi},
year = {2021},
isbn = {9781450396011},
publisher = {Association for Computing Machinery},
address = {New York, NY, USA},
doi = {10.1145/3504006.3504022},
abstract = { Most Japanese persons’ Kanji names have similar characters with ’Hanzi’. For example, ’吉田悠人’ and ’欧阳沛南’ are two persons’ names. ’吉田悠人’ is a Kanji name, ’欧阳沛南’ is a Hanzi name. It is a challenge for a computer to identify the name origins between ’Hanzi’ and ’Kanji’ of a person’s name. In addition, we found that there are limited existing methods to identify more than one hidden property of people’s names at one time. In this paper, we aim to build a method that can identify the hidden properties of Hanzi names and Kanji names. Our novel method can point out the origin, the surname and the given name of a person’s name. The evaluation result shows that our method is better than an existing system ’TextBlob’ on predicting the origins of people’s names. The accuracy of our proposed method is 86.87%.},
booktitle = {The 8th Multidisciplinary International Social Networks Conference},
pages = {79–85},
numpages = {7},
keywords = {Text Diversity, Name Identification, Machine Learning, Hidden property},
location = {Bergen, Norway},
series = {MISNC2021}
}

@inproceedings{asif:nanopub-contradictions:eScience2021,
  abstract={We tackle the problem of automatically detecting conflicting claims in research outputs. This has become even more urgent in recent years, with the increasing volume of scientific publications available. Researchers are struggling to keep pace with the literature, and to efficiently make comparisons between the results of different published studies. We hypothesise that the difficult and time-consuming process of searching and comparing results across research publications can be facilitated using machine-readable, standardised knowledge representation methods. To this end, we propose to exploit Nanopublications as the standard framework to represent the claims in research studies, and use provenance data expressed by the model as an indicator of the source of the contradiction between different claims. We evaluate this idea over the Cooperation Databank (CoDa); a repository of social science studies. Our results show that the use of provenance information can be a good factor to identify the cause of conflicting claims, and that our method can support scientists in comparing literature in a more automated way.},
  author={Asif, Imran and Tiddi, Ilaria and Gray, Alasdair J. G.},
  booktitle={2021 IEEE 17th International Conference on eScience (eScience)}, 
  title={Using Nanopublications to Detect and Explain Contradictory Research Claims}, 
  year={2021},
  pages={1-10},
  doi={10.1109/eScience51609.2021.00010}
}

@inproceedings{Asif:NanopubQuality:eScience2019,  
  author={Asif, Imran and Chen-Burger, Jessica and Gray, Alasdair J. G.},
  booktitle={2019 15th International Conference on eScience (eScience)},   
  title={Data Quality Issues in Current Nanopublications},   
  year={2019},  
  volume={},  
  number={},  
  pages={522-527},  
  abstract={Nanopublications are a granular way of publishing scientific claims together with their associated provenance and publication information. More than 10 million nanopublications have been published by a handful of researchers covering a wide range of topics within the life sciences. We were motivated to replicate an existing analysis of these nanopublications, but then went deeper into the structure of the existing nanopublications. In this paper, we analyse the usage of nanopublications by investigating the distribution of triples in each part and discuss the data quality issues that were subsequently revealed. We argue that there is a need for the community to develop a set of guidelines for the modelling of nanopublications.},  keywords={},  doi={10.1109/eScience.2019.00069},  
  month=sep
}

@inproceedings{DBLP:conf/esws/ZhouGM19,
  abstract  = {The TOUCAN project proposed an ontology for telecommunication networks with hybrid technologies – the TOUCAN Ontology (ToCo), available at http://purl.org/toco/, as well as a knowledge design pattern Device-Interface-Link (DIL) pattern. The core classes and relationships forming the ontology are discussed in detail. The ToCo ontology can describe the physical infrastructure, quality of channel, services and users in heterogeneous telecommunication networks which span multiple technology domains. The DIL pattern is observed and summarised when modelling networks with various technology domains. Examples and use cases of ToCo are presented for demonstration.},
  author    = {Qianru Zhou and
               Alasdair J. G. Gray and
               Stephen McLaughlin},
  title     = {ToCo: An Ontology for Representing Hybrid Telecommunication Networks},
  booktitle = {The Semantic Web - 16th International Conference, {ESWC} 2019, Portoro{\v{z}},
               Slovenia, June 2-6, 2019, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {11503},
  pages     = {507--522},
  publisher = {Springer},
  month     = jun,
  year      = {2019},
  url       = {https://doi.org/10.1007/978-3-030-21348-0\_33},
  doi       = {10.1007/978-3-030-21348-0\_33}
}

@inproceedings{DBLP:conf/wd/ZhouGPM19,
  abstract  = {In this paper, we present SARA, a Semantic Access point Resource Allocation service for heterogenous wireless networks with various wireless access technologies existing together. By automatically reasoning on the knowledge base of the full system provided by a knowledge based autonomic network management system - SEANET, SARA selects the access point providing the best quality of service among the different access technologies. Based on an ontology assisted knowledge based system SEANET, SARA can also adapt the access point selection strategy according to customer defined rules automatically. Results of our evaluation based on emulated networks with hybrid access technologies and various scales show that SARA is able to improve the channel condition, in terms of throughput, evidently. Comparisons with current AP selection algorithms demonstrate that SARA outperforms the existing AP selection algorithms. The overhead in terms of time expense is reasonable and is shown to be faster than traditional access point selection approaches.},
  author    = {Qianru Zhou and
               Alasdair J. G. Gray and
               Dimitrios Pezaros and
               Stephen McLaughlin},
  title     = {{SARA} - {A} Semantic Access Point Resource Allocation Service for
               Heterogenous Wireless Networks},
  booktitle = {2019 Wireless Days, {WD} 2019, Manchester, United Kingdom, April 24-26,
               2019},
  pages     = {1--8},
  publisher = {{IEEE}},
  month     = apr,
  year      = {2019},
  url       = {https://doi.org/10.1109/WD.2019.8734260},
  doi       = {10.1109/WD.2019.8734260}
}

@inproceedings{DBLP:conf/netsoft/RotsosFKHZGWM18,
  abstract  = {Modern Software Defined Networking (SDN) control stacks consist of multiple abstraction and virtualization layers to enable flexibility in the development of new control features. Rich data modeling frameworks are essential when sharing information across control layers. Unfortunately, existing Network Operating System (NOS) data modeling capabilities are limited to simple type-checking and code templating. We present an exploration of a more extreme point on SDN data modeling: ReasoNet. Developers can use semantic web technologies to enrich their data models with reasoning rules and integrity/consistency constraints, and automate state inference across layers. We demonstrate the ability of ReasoNet to automate state verification and cross-layer debugging, through the implementation of two popular control applications, a learning switch and a Quality of Service (QoS) policy engine.},
  author    = {Charalampos Rotsos and
               Arsham Farshad and
               Daniel King and
               David Hutchison and
               Qianru Zhou and
               Alasdair J. G. Gray and
               Cheng{-}Xiang Wang and
               Stephen McLaughlin},
  title     = {ReasoNet: Inferring Network Policies Using Ontologies},
  booktitle = {4th {IEEE} Conference on Network Softwarization and Workshops, NetSoft
               2018, Montreal, QC, Canada, June 25-29, 2018},
  pages     = {159--167},
  publisher = {{IEEE}},
  month     = jun,
  year      = {2018},
  url       = {https://doi.org/10.1109/NETSOFT.2018.8460050},
  doi       = {10.1109/NETSOFT.2018.8460050}
}

@inproceedings{Hussain:MedicalMappings:MIE2014,
  author    = {Sajjad Hussain and
               Hong Sun and
               Ali Anil Sinaci and
               Gokce Banu Laleci Erturkmen and
               Charles N. Mead and
               Alasdair J. G. Gray and
               Deborah L. McGuinness and
               Eric Prud'hommeaux and
               Christel Daniel and
               Kerstin Forsberg},
  title     = {A Framework for Evaluating and Utilizing Medical Terminology Mappings},
  booktitle = {e-Health - For Continuity of Care - Proceedings of MIE2014, the 25th
               European Medical Informatics Conference, Istanbul, Turkey, August
               31 - September 3, 2014},
  series    = {Studies in Health Technology and Informatics},
  volume    = {205},
  pages     = {594--598},
  publisher = {{IOS} Press},
  month     = sep,
  year      = {2014},
  url       = {https://doi.org/10.3233/978-1-61499-432-9-594},
  doi       = {10.3233/978-1-61499-432-9-594}
}

@inproceedings{Batchelor:SciLenses:ISWC2014,
  author    = {Colin R. Batchelor and
               Christian Y. A. Brenninkmeijer and
               Christine Chichester and
               Mark Davies and
               Daniela Digles and
               Ian Dunlop and
               Chris T. A. Evelo and
               Anna Gaulton and
               Carole A. Goble and
               Alasdair J. G. Gray and
               Paul T. Groth and
               Lee Harland and
               Karen Karapetyan and
               Antonis Loizou and
               John P. Overington and
               Steve Pettifer and
               Jon Steele and
               Robert Stevens and
               Valery Tkachenko and
               Andra Waagmeester and
               Antony J. Williams and
               Egon L. Willighagen},
  title     = {Scientific Lenses to Support Multiple Views over Linked Chemistry
               Data},
  booktitle = {The Semantic Web - {ISWC} 2014 - 13th International Semantic Web Conference,
               Riva del Garda, Italy, October 19-23, 2014. Proceedings, Part {I}},
  series    = {Lecture Notes in Computer Science},
  volume    = {8796},
  pages     = {98--113},
  publisher = {Springer},
  month     = oct,
  year      = {2014},
  note      = {(Alphabetical authorship)},
  url       = {https://doi.org/10.1007/978-3-319-11964-9\_7},
  doi       = {10.1007/978-3-319-11964-9\_7}
}

@inproceedings{Galpin:SensorBench:SSDBM2014,
  author    = {Ixent Galpin and
               Alan B. Stokes and
               George Valkanas and
               Alasdair J. G. Gray and
               Norman W. Paton and
               Alvaro A. A. Fernandes and
               Kai{-}Uwe Sattler and
               Dimitrios Gunopulos},
  title     = {SensorBench: benchmarking approaches to processing wireless sensor
               network data},
  booktitle = {Conference on Scientific and Statistical Database Management, {SSDBM}
               '14, Aalborg, Denmark, June 30 - July 02, 2014},
  pages     = {21:1--21:12},
  publisher = {{ACM}},
  month     = jun,
  year      = {2014},
  url       = {https://doi.org/10.1145/2618243.2618252},
  doi       = {10.1145/2618243.2618252}
}

@inproceedings{DBLP:conf/semweb/GobleGHKLMRSTWW13,
  author    = {Carole A. Goble and
               Alasdair J. G. Gray and
               Lee Harland and
               Karen Karapetyan and
               Antonis Loizou and
               Ivan Mikhailov and
               Yrj{\"{a}}n{\"{a}} Rankka and
               Stefan Senger and
               Valery Tkachenko and
               Antony J. Williams and
               Egon L. Willighagen},
  title     = {Incorporating Commercial and Private Data into an Open Linked Data
               Platform for Drug Discovery},
  booktitle = {The Semantic Web - {ISWC} 2013 - 12th International Semantic Web Conference,
               Sydney, NSW, Australia, October 21-25, 2013, Proceedings, Part {II}},
  series    = {Lecture Notes in Computer Science},
  volume    = {8219},
  pages     = {65--80},
  publisher = {Springer},
  month     = oct,
  year      = {2013},
  url       = {https://doi.org/10.1007/978-3-642-41338-4\_5},
  doi       = {10.1007/978-3-642-41338-4\_5}
}

@inproceedings{DBLP:conf/esws/GrayGKKCPSFGFPCKRMG11,
  abstract  = {Sensing devices are increasingly being deployed to monitor the physical world around us. One class of application for which sensor data is pertinent is environmental decision support systems, e.g. flood emergency response. However, in order to interpret the readings from the sensors, the data needs to be put in context through correlation with other sensor readings, sensor data histories, and stored data, as well as juxtaposing with maps and forecast models. In this paper we use a flood emergency response planning application to identify requirements for a semantic sensor web. We propose a generic service architecture to satisfy the requirements that uses semantic annotations to support well-informed interactions between the services. We present the SemSorGrid4Env realisation of the architecture and illustrate its capabilities in the context of the example application.},
  author    = {Alasdair J. G. Gray and
               Raul Garcia{-}Castro and
               Kostis Kyzirakos and
               Manos Karpathiotakis and
               Jean-Paul Calbimonte and
               Kevin R. Page and
               Jason Sadler and
               Alex Frazer and
               Ixent Galpin and
               Alvaro A. A. Fernandes and
               Norman W. Paton and
               {\'{O}}scar Corcho and
               Manolis Koubarakis and
               David De Roure and
               Kirk Martinez and
               Asunci{\'{o}}n G{\'{o}}mez{-}P{\'{e}}rez},
  title     = {A Semantically Enabled Service Architecture for Mashups over Streaming
               and Stored Data},
  booktitle = {The Semanic Web: Research and Applications - 8th Extended Semantic
               Web Conference, {ESWC} 2011, Heraklion, Crete, Greece, May 29 - June
               2, 2011, Proceedings, Part {II}},
  year =      {2011},
  month =     may,
  url       = {https://doi.org/10.1007/978-3-642-21064-8\_21},
  doi       = {10.1007/978-3-642-21064-8\_21}
}

@inproceedings{DBLP:conf/semweb/CalbimonteCG10,
  author    = {Jean-Paul Calbimonte and
               {\'{O}}scar Corcho and
               Alasdair J. G. Gray},
  title     = {Enabling Ontology-Based Access to Streaming Data Sources},
  booktitle = {The Semantic Web - {ISWC} 2010 - 9th International Semantic Web Conference,
               {ISWC} 2010, Shanghai, China, November 7-11, 2010, Revised Selected
               Papers, Part {I}},
  series    = {Lecture Notes in Computer Science},
  volume    = {6496},
  pages     = {96--111},
  publisher = {Springer},
  month     = nov,
  note      = {(Alphabetical authorship, equal responsibility)},
  year      = {2010},
  url       = {https://doi.org/10.1007/978-3-642-17746-0\_7},
  doi       = {10.1007/978-3-642-17746-0\_7}
}

@inproceedings{DBLP:conf/esws/GrayGO09,
  author    = {Alasdair J. G. Gray and
               Norman Gray and
               Iadh Ounis},
  title     = {Can {RDB2RDF} Tools Feasibily Expose Large Science Archives for Data
               Integration?},
  booktitle = {The Semantic Web: Research and Applications, 6th European Semantic
               Web Conference, {ESWC} 2009, Heraklion, Crete, Greece, May 31-June
               4, 2009, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {5554},
  pages     = {491--505},
  publisher = {Springer},
  month     = jun,
  year      = {2009},
  url       = {https://doi.org/10.1007/978-3-642-02121-3\_37},
  doi       = {10.1007/978-3-642-02121-3\_37}
}

@inproceedings{DBLP:conf/bncod/GrayNW06,
  author    = {Alasdair J. G. Gray and
               Werner Nutt and
               M. Howard Williams},
  title     = {Sources of Incompleteness in Grid Publishing},
  booktitle = {Flexible and Efficient Information Handling, 23rd British National
               Conference on Databases, {BNCOD} 23, Belfast, Northern Ireland, UK,
               July 18-20, 2006, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {4042},
  pages     = {94--101},
  publisher = {Springer},
  month     = jul,
  year      = {2006},
  url       = {https://doi.org/10.1007/11788911\_8},
  doi       = {10.1007/11788911\_8}
}

@inproceedings{DBLP:conf/iiwas/GrayWN06,
  author    = {Alasdair J. G. Gray and
               M. Howard Williams and
               Werner Nutt},
  title     = {Answering Arbitrary Conjunctive Queries over Incomplete Data Stream
               Histories},
  booktitle = {iiWAS'2006 - The Eighth International Conference on Information Integration
               and Web-based Applications Services, 4-6 December 2006, Yogyakarta,
               Indonesia},
  series    = {books@ocg.at},
  volume    = {214},
  pages     = {259--268},
  publisher = {Austrian Computer Society},
  month     = dec,
  year      = {2006}
}

@inproceedings{DBLP:conf/bncod/GrayN05,
  author    = {Alasdair J. G. Gray and
               Werner Nutt},
  title     = {Republishers in a Publish/Subscribe Architecture for Data Streams},
  booktitle = {Database: Enterprise, Skills and Innovation, 22nd British National
               Conference on Databases, {BNCOD} 22, Sunderland, UK, July 5-7, 2005,
               Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {3567},
  pages     = {179--184},
  publisher = {Springer},
  month     = jul,
  year      = {2005},
  url       = {https://doi.org/10.1007/11511854\_17},
  doi       = {10.1007/11511854\_17}
}

@inproceedings{DBLP:conf/egc/ByromCCCCCDDFGHKLLMMNOPTWW05,
  author    = {Rob Byrom and
               Brian A. Coghlan and
               Andrew W. Cooke and
               Roney Cordenonsi and
               Linda Cornwall and
               Martin Craig and
               Abdeslem Djaoui and
               Alastair Duncan and
               Steve Fisher and
               Alasdair J. G. Gray and
               Steve Hicks and
               Stuart Kenny and
               Jason Leake and
               Oliver Lyttleton and
               James Magowan and
               Robin Middleton and
               Werner Nutt and
               David O'Callaghan and
               Norbert Podhorszki and
               Paul Taylor and
               John Walk and
               Antony J. Wilson},
  title     = {Fault Tolerance in the {R-GMA} Information and Monitoring System},
  booktitle = {Advances in Grid Computing - {EGC} 2005, European Grid Conference,
               Amsterdam, The Netherlands, February 14-16, 2005, Revised Selected
               Papers},
  series    = {Lecture Notes in Computer Science},
  volume    = {3470},
  pages     = {751--760},
  publisher = {Springer},
  month     = feb,
  year      = {2005},
  Note      = {(Alphabetical authorship)},
  url       = {https://doi.org/10.1007/11508380\_76},
  doi       = {10.1007/11508380\_76}
}

@inproceedings{DBLP:conf/otm/GrayN05,
  author    = {Alasdair J. G. Gray and
               Werner Nutt},
  title     = {A Data Stream Publish/Subscribe Architecture with Self-adapting Queries},
  booktitle = {On the Move to Meaningful Internet Systems 2005: CoopIS, DOA, and
               ODBASE, {OTM} Confederated International Conferences CoopIS, DOA,
               and {ODBASE} 2005, Agia Napa, Cyprus, October 31 - November 4, 2005,
               Proceedings, Part {I}},
  series    = {Lecture Notes in Computer Science},
  volume    = {3760},
  pages     = {420--438},
  publisher = {Springer},
  month     = oct,
  year      = {2005},
  url       = {https://doi.org/10.1007/11575771\_27},
  doi       = {10.1007/11575771\_27}
}

@inproceedings{Cooke:RGMA:CoopIS2003,
  author    = {Andrew W. Cooke and
               Alasdair J. G. Gray and
               Lisha Ma and
               Werner Nutt and
               James Magowan and
               Manfred Oevers and
               Paul Taylor and
               Rob Byrom and
               Laurence Field and
               Steve Hicks and
               Jason Leake and
               Manish Soni and
               Antony J. Wilson and
               Roney Cordenonsi and
               Linda Cornwall and
               Abdeslem Djaoui and
               Steve Fisher and
               Norbert Podhorszki and
               Brian A. Coghlan and
               Stuart Kenny and
               David O'Callaghan},
  title     = {{R-GMA:} An Information Integration System for Grid Monitoring},
  booktitle = {On The Move to Meaningful Internet Systems 2003: CoopIS, DOA, and
               {ODBASE} - {OTM} Confederated International Conferences, CoopIS, DOA,
               and {ODBASE} 2003, Catania, Sicily, Italy, November 3-7, 2003},
  series    = {Lecture Notes in Computer Science},
  volume    = {2888},
  pages     = {462--481},
  publisher = {Springer},
  month     = nov,
  year      = {2003},
  url       = {https://doi.org/10.1007/978-3-540-39964-3\_29},
  doi       = {10.1007/978-3-540-39964-3\_29}
}