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I cant download GB GTDB-Tk db #55

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ewars opened this issue Nov 30, 2024 · 1 comment
Open

I cant download GB GTDB-Tk db #55

ewars opened this issue Nov 30, 2024 · 1 comment

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@ewars
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ewars commented Nov 30, 2024

Hi,

I’m having trouble downloading the GTDB-Tk database using the following command:
wget -c ftp://download.nmdc.cn/tools/meta/gtdb/gtdbtk_r214_data.tar.gz.

I receive the following output:

--2024-11-30 14:06:23-- ftp://download.nmdc.cn/tools/meta/gtdb/gtdbtk_r214_data.tar.gz
(try: 9) => 'gtdbtk_r214_data.tar.gz'
Connecting to download.nmdc.cn (download.nmdc.cn)|159.226.237.50|:21... failed: Connection timed out.
Retrying.

I also tried downloading it directly, but the link does not load. I registered on the site, but it seems that the directory /tools/meta/gtdb/gtdbtk_r214_data.tar.gz doesn’t exist.

Instead, I downloaded this file:
https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/

However, I’m not sure if these are the same files. Could you clarify if this file is equivalent to the original GTDB-Tk database?

Thank you..

@jayramr
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jayramr commented Jan 22, 2025

Hi,

I'm facing the same problem.

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