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Orchestration train #10

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Orchestration train #10

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infini11
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infini11 and others added 30 commits June 2, 2022 16:25
@infini11
start to organize Feature engineering's part
3a50201
@infini11
Some steps feature engineering and tests are written
17ca4ec
@infini11
But they need to be improved
14a5d84
@infini11
Refarctoring code step : some variables need to be updated
59ed447
@infini11
Merge branch 'dev' of https://github.com/Aura-healthcare/seizure_dete…
90fb761 
…ction_pipeline into upcoming_sakhite

Conflicts:
	src/usecase/train_model.py
@infini11
Merging file train_model.py
6239ee5
@infini11
Update train_model.py
c256e7b
@infini11
Some refactoring about feature engineering briks
ecfb651
@infini11
Feature eng and test feature eng. Need be improved
ce484bc
@infini11
Refacto:
42dd73b 
- all function for feature engineering
- adding more delay for every chosen features
- test of feature engineering
@infini11
Refacto:
0bb60a5 
- using xgboost model
- setup parameters of xgboost
- training model for each patient
@infini11
Update: xgb model params
7a291f3
@infini11
Merge branch 'upcoming_sakhite' of https://github.com/Aura-healthcare…
e441e89 
…/seizure_detection_pipeline into upcoming_sakhite

Conflicts:
	src/usecase/train_model.py
@infini11
Fix: bug from test_feature_engineering
dc62f50
@infini11
add test data
46da842
@infini11
Fix: bug in feature engineering file
7ce55b5
@infini11
Fix : file path for github
a5ce78b
@infini11
REFACT: Feature engineerning
eb817ba
@infini11
Merge branch 'dev' of https://github.com/Aura-healthcare/seizure_dete…
927a144 
…ction_pipeline into orchestration_train
@infini11
Dev : Training orchestration for seizure detection
0b0c1f7
@infini11
Refacto(debut): Feature eng to data_loading, data_cleaning and time_s…
e6d102f 
…eries_processing
@infini11
Refact : Time series processing
420fb86 
 - create_time_features
 - compute_contextuals_features
@infini11
Refact : Test time series processing
15cb66d 
- Diff method
- Test for diff method
@infini11
Refacto: Time series processing
2dc0758
@infini11
Refacto: Adding constants file
9d40b7c
@infini11
Feature preparation and test feature preparation
991d6a9
@infini11
Refacto: prepare feature pipeline
30f0a57
@infini11
Refacto : ML pipeline orchestration
0845784
@infini11
docker-compose file
93eb305
Change mlflow version
f78e3df
Sakhite and others added 13 commits August 3, 2022 17:09
Merge branch 'orchestration_train' of https://github.com/Aura-healthc…
635457f 
…are/seizure_detection_pipeline into orchestration_train
Refacto : train pipeline
f6a6afc
@infini11
Delete docker-compose
0a711b7
Change version of mlflow, config updated
a5e23fc
Merge branch 'orchestration_train' of https://github.com/Aura-healthc…
8f73e78 
…are/seizure_detection_pipeline into orchestration_train
Merge branch 'orchestration_train' of https://github.com/Aura-healthc…
5900ffe 
…are/seizure_detection_pipeline into orchestration_train
Merge branch 'orchestration_train' of https://github.com/Aura-healthc…
a129505 
…are/seizure_detection_pipeline into orchestration_train

# Please enter a commit message to explain why this merge is necessary,
# especially if it merges an updated upstream into a topic branch.
#
# Lines starting with '#' will be ignored, and an empty message aborts
# the commit.
@infini11
Delete env_aura directory
9172281
@infini11
Fixed : MLflow dependencies conflits
8edd221
@infini11
REFACTO : Model_params_dict
c29334e
@infini11
REFACTO : Train pipeline for manually uses
211a28e
@infini11
Last update
85de392
@infini11
Some config
3c6c8fd
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@infini11