diff --git a/modules/spectoconfig/src/main/java/com/axway/apim/config/APIConfig.java b/modules/spectoconfig/src/main/java/com/axway/apim/config/APIConfig.java
index 3e6313b6..7bfd571d 100644
--- a/modules/spectoconfig/src/main/java/com/axway/apim/config/APIConfig.java
+++ b/modules/spectoconfig/src/main/java/com/axway/apim/config/APIConfig.java
@@ -47,9 +47,6 @@ public Map<String, OutboundProfile> getOutboundProfiles() {
 
 
     public List<SecurityProfile> getSecurityProfiles() {
-        if (api.getSecurityProfiles().size() == 1) {
-            return Collections.emptyList();
-        }
         return api.getSecurityProfiles();
     }
 
diff --git a/modules/spectoconfig/src/main/java/com/axway/apim/config/GenerateTemplate.java b/modules/spectoconfig/src/main/java/com/axway/apim/config/GenerateTemplate.java
index 15247a1a..c2bf2108 100644
--- a/modules/spectoconfig/src/main/java/com/axway/apim/config/GenerateTemplate.java
+++ b/modules/spectoconfig/src/main/java/com/axway/apim/config/GenerateTemplate.java
@@ -214,6 +214,7 @@ public APIConfig generateTemplate(GenerateTemplateParameters parameters) throws
         String frontendAuthType = parameters.getFrontendAuthType();
         // If frontendAuthType is null, use authentication from openapi spec. If none found, set it as pass through
         List<SecurityProfile> securityProfiles = addInboundSecurityToAPI(frontendAuthType);
+        api.setSecurityProfiles(securityProfiles);
         String backendAuthType = parameters.getBackendAuthType();
         addOutboundSecurityToAPI(api, backendAuthType);
         String apiSpecLocation;
@@ -228,7 +229,6 @@ public APIConfig generateTemplate(GenerateTemplateParameters parameters) throws
             List<APIMethod> methods = addMethods(openAPI);
             api.setApiMethods(methods);
         }
-
         if (parameters.isInboundPerMethodOverride()) {
             Map<String, InboundProfile> inboundProfileMap = addInboundPerMethodOverride(openAPI, api, securityProfiles);
             api.setInboundProfiles(inboundProfileMap);