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assembly.yml_BACK
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assembly.yml_BACK
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name: assembly
channels:
- bioconda
- anaconda
- r
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=0_gnu
- alsa-lib=1.1.5=h516909a_1002
- aragorn=1.2.38=h470a237_2
- barrnap=0.9=3
- bedtools=2.29.2=hc088bd4_0
- blas=1.0=mkl
- blast=2.9.0=h20b68b9_1
- boost=1.68.0=py35h3e44d54_0
- boost-cpp=1.68.0=h11c811c_1000
- bowtie2=2.3.4.3=py35h2d50403_0
- bzip2=1.0.8=h516909a_2
- ca-certificates=2020.4.5.1=hecc5488_0
- certifi=2016.9.26=py35_0
- circos=0.69.8=0
- click=7.1.1=pyh8c360ce_0
- colormath=3.0.0=py_2
- cycler=0.10.0=py_2
- dbus=1.13.12=h746ee38_0
- decorator=4.4.2=py_0
- expat=2.2.9=he1b5a44_2
- fastqc=0.11.9=0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- fontconfig=2.13.1=he4413a7_1000
- freebayes=0.9.21.7=0
- freetype=2.10.1=he06d7ca_0
- future=0.16.0=py35_2
- gettext=0.19.8.1=hc5be6a0_1002
- giflib=5.2.1=h516909a_2
- glib=2.56.2=had28632_1001
- glimmerhmm=3.0.4=pl526hf484d3e_3
- gmp=6.2.0=he1b5a44_2
- gnutls=3.6.5=hd3a4fd2_1002
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- hmmer=3.3=he1b5a44_1
- icu=58.2=hf484d3e_1000
- infernal=1.1.2=h14c3975_2
- intel-openmp=2019.4=243
- jinja2=2.11.2=pyh9f0ad1d_0
- joblib=0.14.1=py_0
- jpeg=9c=h14c3975_1001
- kiwisolver=1.0.1=py35hf484d3e_0
- lcms2=2.9=hbd6801e_1
- libedit=3.1.20181209=hc058e9b_0
- libffi=3.2.1=he1b5a44_1007
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=9.2.0=h24d8f2e_2
- libgd=2.2.5=h0d07dcb_1005
- libgfortran-ng=7.3.0=hdf63c60_5
- libgomp=9.2.0=h24d8f2e_2
- libiconv=1.15=h516909a_1006
- libidn=7.45.0=2
- libidn11=1.34=h1cef754_0
- libpng=1.6.37=hed695b0_1
- libstdcxx-ng=9.2.0=hdf63c60_2
- libtiff=4.1.0=hc3755c2_3
- libuuid=2.32.1=h14c3975_1000
- libwebp=1.0.2=h56121f0_5
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.9=hea5a465_1
- lz4-c=1.9.2=he1b5a44_0
- lzstring=1.0.4=py_1001
- markdown=3.2.1=py_0
- markupsafe=1.0=py35h14c3975_1
- matplotlib=3.0.0=py35h5429711_0
- minced=0.4.2=0
- mkl=2018.0.3=1
- mkl_fft=1.0.6=py35h7dd41cf_0
- mkl_random=1.0.1=py35h4414c95_1
- multiqc=1.6=py35h24bf2e0_0
- ncurses=6.1=hf484d3e_1002
- nettle=3.4.1=h1bed415_1002
- networkx=2.4=py_1
- numpy=1.15.2=py35h1d66e8a_0
- numpy-base=1.15.2=py35h81de0dd_0
- openjdk=11.0.1=h600c080_1018
- openssl=1.0.2u=h516909a_0
- parallel=20160622=1
- pcre=8.44=he1b5a44_0
- perl=5.26.2=h516909a_1006
- perl-app-cpanminus=1.7044=pl526_1
- perl-archive-tar=2.32=pl526_0
- perl-autoloader=5.74=pl526_2
- perl-bioperl=1.6.924=4
- perl-carp=1.38=pl526_3
- perl-clone=0.42=pl526h516909a_0
- perl-common-sense=3.74=pl526_2
- perl-compress-raw-bzip2=2.087=pl526he1b5a44_0
- perl-compress-raw-zlib=2.087=pl526hc9558a2_0
- perl-config-general=2.63=pl526_0
- perl-constant=1.33=pl526_1
- perl-digest-perl-md5=1.9=pl526_1
- perl-dynaloader=1.25=pl526_1
- perl-exporter=5.72=pl526_1
- perl-exporter-tiny=1.002001=pl526_0
- perl-extutils-makemaker=7.36=pl526_1
- perl-file-path=2.16=pl526_0
- perl-file-temp=0.2304=pl526_2
- perl-font-ttf=1.06=pl526_0
- perl-gd=2.71=pl526he860b03_0
- perl-io-compress=2.087=pl526he1b5a44_0
- perl-io-string=1.08=pl526_3
- perl-io-zlib=1.10=pl526_2
- perl-json=4.02=pl526_0
- perl-json-xs=2.34=pl526h6bb024c_3
- perl-list-moreutils=0.428=pl526_1
- perl-list-moreutils-xs=0.428=pl526_0
- perl-math-bezier=0.01=pl526_1
- perl-math-round=0.07=pl526_1
- perl-math-vecstat=0.08=pl526_1
- perl-module-implementation=0.09=pl526_2
- perl-module-runtime=0.016=pl526_1
- perl-number-format=1.75=pl526_3
- perl-params-validate=1.29=pl526h14c3975_1
- perl-parent=0.236=pl526_1
- perl-pathtools=3.75=pl526h14c3975_1
- perl-readonly=2.05=pl526_0
- perl-regexp-common=2017060201=pl526_0
- perl-scalar-list-utils=1.52=pl526h516909a_0
- perl-set-intspan=1.19=pl526_1
- perl-statistics-basic=1.6611=pl526_2
- perl-svg=2.84=pl526_0
- perl-text-format=0.59=pl526_2
- perl-threaded=5.26.0=0
- perl-time-hires=1.9760=pl526h14c3975_1
- perl-try-tiny=0.30=pl526_1
- perl-types-serialiser=1.0=pl526_2
- perl-xml-namespacesupport=1.12=pl526_0
- perl-xml-parser=2.44=pl526h4e0c4b3_7
- perl-xml-sax=1.02=pl526_0
- perl-xml-sax-base=1.09=pl526_0
- perl-xml-sax-expat=0.51=pl526_3
- perl-xml-simple=2.25=pl526_1
- perl-xsloader=0.24=pl526_0
- perl-yaml=1.29=pl526_0
- pilon=1.23=2
- pip=20.0.2=py_2
- prodigal=2.6.3=h516909a_2
- prokka=1.12
- pthread-stubs=0.4=h14c3975_1001
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyqt=5.9.2=py35h05f1152_2
- python=3.5.5=h5001a0f_2
- python-dateutil=2.8.1=py_0
- pytz=2019.3=py_0
- pyyaml=3.13=py35h470a237_1
- qt=5.9.6=h8703b6f_2
- quast=5.0.2=py35pl526ha92aebf_0
- readline=7.0=hf8c457e_1001
- requests=2.12.5=py35_0
- samtools=1.3.1=0
- setuptools=40.2.0=py35_0
- simplejson=3.8.1=py35_0
- sip=4.19.8=py35hf484d3e_0
- six=1.14.0=py_1
- spades=3.13.1=0
- spectra=0.0.11=py_1
- sqlite=3.31.1=h7b6447c_0
- tbl2asn=25.7=0
- tk=8.6.10=hed695b0_0
- tornado=5.1.1=py35h470a237_0
- trimmomatic=0.39=1
- unicycler=0.4.4=py35_0
- wheel=0.34.2=py_1
- xorg-fixesproto=5.0=h14c3975_1002
- xorg-inputproto=2.3.2=h14c3975_1002
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libx11=1.6.9=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxfixes=5.0.3=h516909a_1004
- xorg-libxi=1.7.10=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-libxtst=1.2.3=h516909a_1002
- xorg-recordproto=1.14.2=h516909a_1002
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.5=h516909a_0
- yaml=0.1.7=h14c3975_1001
- zlib=1.2.11=h516909a_1006
- zstd=1.4.4=h6597ccf_3
prefix: /processing_Data/bioinformatics/pipelines/miniconda3/envs/assembly