From 00f8692670fe0d5c72d990f4a67352a656f5888f Mon Sep 17 00:00:00 2001 From: luissian Date: Mon, 22 Jan 2024 21:33:07 +0100 Subject: [PATCH] test5 --- .github/workflows/tests.yml | 28 ++++++++++++++++------------ 1 file changed, 16 insertions(+), 12 deletions(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 9110019..a1e5173 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -6,20 +6,24 @@ on: push: jobs: - test_ci: - name: Code testing + create-conda-env: runs-on: ubuntu-latest - + steps: - - uses: actions/checkout@v3 - - uses: conda-incubator/setup-miniconda@v3 + - name: Checkout repository + uses: actions/checkout@v2 + + - name: Set up Miniconda + uses: conda-incubator/setup-miniconda@v2 with: - activate-environment: taranis_env + activate-environment: myenv environment-file: environment.yml - auto-activate-base: false - - name: Activate Conda environment - run: source $CONDA/etc/profile.d/conda.sh && conda activate taranis_env - - name: check conda + + - name: Verify Conda environment + run: conda env list + + - name: Run your script run: | - conda list - prokka -h \ No newline at end of file + source $CONDA/etc/profile.d/conda.sh + conda activate myenv + prokka -h \ No newline at end of file