3.0-Module3_Visualizing_ORA_analysis.Rmd

# Module 3: Network Visualization and Analysis with Cytoscape

 *<font color="#827e9c">Ruth Isserlin</font>*
 
 **Module 3 Cytoscape** 
 
 [Cytoscape - Lecture](./lectures/Pathways_2024_Module3-part1-Cytoscape-RI.pdf)
 
 **Module 3 Cytoscape Lab**

[Introduction to practical Cytoscape Lab (slides)](./lectures/Pathways_2024_Module3_cytoscape_lab_introduction_RI.pdf)

[Lab practical Cytoscape Primer](#cytoscape_mod3) 
 
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 **Module 3 Enrichment Map** 
    
[Enrichment Map Lecture](./lectures/Pathways_2024_Module3-part2-EM-RI.pdf) 
 
 **Module 3 Enrichment Map Lab**

[Introduction to practical EM Lab (slides)](./lectures/Pathways_2024_Module3_EM_lab_introduction_RI.pdf)
 
[Lab practical part 1 (g:Profiler)](#gprofiler_mod3)   

[Lab practical part 2 (GSEA)](#gseq_mod3)