Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Human assembly with bowtie2 #484

Open
chrissy005 opened this issue Aug 7, 2024 · 0 comments
Open

Human assembly with bowtie2 #484

chrissy005 opened this issue Aug 7, 2024 · 0 comments

Comments

@chrissy005
Copy link

Hello,

I am using bowtie2 for the first time to remove human-associated sequences from my set of environmental sequences.

However I am not certain on which build I should download as there are 3 options :
-Human / GRCh38 no-alt analysis set1
-Human / GRCh38 no-alt +decoy set1
-Human / GRCh38 + major SNVs

Is there any description for these?
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@chrissy005