ENH Update pyrodigal version (#18) #44
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| name: gmsc_mapper_test | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: | |
| - "3.8" | |
| - "3.9" | |
| - "3.10" | |
| - "3.11" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: test | |
| python-version: ${{ matrix.python-version }} | |
| auto-activate-base: false | |
| - name: Install dependencies | |
| shell: bash | |
| run: | | |
| pip install pytest | |
| pip install atomicwrites | |
| pip install pyrodigal | |
| pip install pandas | |
| pip install biopython | |
| python ./setup.py install | |
| - name: Test with pytest | |
| run: | | |
| python -m pytest ./tests |