You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Please help me to solve the problem with MIRTK using "make -j 8". I am using macOS 12.5. I followed the installation steps based on this page "https://mirtk.github.io/install.html". configuration and generation were done!
Following is the error that I get from make -j 8:
/Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk/usr/include/math.h:155:5: note: expanded from macro 'isfinite'
( sizeof(x) == sizeof(float) ? _inline_isfinitef((float)(x))
^
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Packages/DrawEM/ThirdParty/ANTs/N4.cxx:15:
In file included from /usr/local/include/ITK-5.2/itkImageFileReader.h:24:
In file included from /usr/local/include/ITK-5.2/itkImageIOBase.h:30:
In file included from /usr/local/include/ITK-5.2/itkSymmetricSecondRankTensor.h:28:
In file included from /usr/local/include/ITK-5.2/itkMatrix.h:25:
/usr/local/include/ITK-5.2/vnl/vnl_matrix_fixed.hxx:787:37: error: expected unqualified-id
std::cerr << char(vnl_math::isfinite(this->data[i][ j]) ? '-' : '*');
^
/Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk/usr/include/math.h:155:5: note: expanded from macro 'isfinite'
( sizeof(x) == sizeof(float) ? __inline_isfinitef((float)(x))
^
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/src/Vtk.cc:22:
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/include/mirtk/Vtk.h:33:
In file included from /usr/local/include/vtk-9.2/vtkPolyData.h:66:
In file included from /usr/local/include/vtk-9.2/vtkPointSet.h:58:
In file included from /usr/local/include/vtk-9.2/vtkCellTypes.h:44:
In file included from /usr/local/include/vtk-9.2/vtkIdTypeArray.h:27:
In file included from /usr/local/include/vtk-9.2/vtkAOSDataArrayTemplate.h:38:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.h:443:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.txx:21:
/usr/local/include/vtk-9.2/vtkMath.h:2102:15: error: expected unqualified-id
return std::isinf(x);
^
/usr/local/include/math.h:160:5: note: expanded from macro 'isinf'
( sizeof(x) == sizeof(float) ? __inline_isinff((float)(x))
^
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/src/Vtk.cc:22:
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/include/mirtk/Vtk.h:33:
In file included from /usr/local/include/vtk-9.2/vtkPolyData.h:66:
In file included from /usr/local/include/vtk-9.2/vtkPointSet.h:58:
In file included from /usr/local/include/vtk-9.2/vtkCellTypes.h:44:
In file included from /usr/local/include/vtk-9.2/vtkIdTypeArray.h:27:
In file included from /usr/local/include/vtk-9.2/vtkAOSDataArrayTemplate.h:38:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.h:443:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.txx:21:
/usr/local/include/vtk-9.2/vtkMath.h:2115:15: error: expected unqualified-id
return std::isnan(x);
^
/usr/local/include/math.h:165:5: note: expanded from macro 'isnan'
( sizeof(x) == sizeof(float) ? __inline_isnanf((float)(x))
^
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/src/Vtk.cc:22:
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/include/mirtk/Vtk.h:33:
In file included from /usr/local/include/vtk-9.2/vtkPolyData.h:66:
In file included from /usr/local/include/vtk-9.2/vtkPointSet.h:58:
In file included from /usr/local/include/vtk-9.2/vtkCellTypes.h:44:
In file included from /usr/local/include/vtk-9.2/vtkIdTypeArray.h:27:
In file included from /usr/local/include/vtk-9.2/vtkAOSDataArrayTemplate.h:38:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.h:443:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.txx:21:
/usr/local/include/vtk-9.2/vtkMath.h:2128:15: error: expected unqualified-id
return std::isfinite(x);
^
/usr/local/include/math.h:155:5: note: expanded from macro 'isfinite'
( sizeof(x) == sizeof(float) ? __inline_isfinitef((float)(x))
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
11 errors generated.
make[2]: *** [Modules/Common/src/CMakeFiles/LibCommon.dir/Vtk.cc.o] Error 1
make[1]: *** [Modules/Common/src/CMakeFiles/LibCommon.dir/all] Error 2
20 errors generated.
make[2]: *** [Packages/DrawEM/ThirdParty/ANTs/CMakeFiles/N4.dir/N4.cxx.o] Error 1
make[1]: *** [Packages/DrawEM/ThirdParty/ANTs/CMakeFiles/N4.dir/all] Error 2
make: *** [all] Error 2
I appreciate your help for solving the issue,
Best,
Parinaz.
The text was updated successfully, but these errors were encountered:
Hello,
Please help me to solve the problem with MIRTK using "make -j 8". I am using macOS 12.5. I followed the installation steps based on this page "https://mirtk.github.io/install.html". configuration and generation were done!
Following is the error that I get from make -j 8:
/Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk/usr/include/math.h:155:5: note: expanded from macro 'isfinite'
( sizeof(x) == sizeof(float) ? _inline_isfinitef((float)(x))
^
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Packages/DrawEM/ThirdParty/ANTs/N4.cxx:15:
In file included from /usr/local/include/ITK-5.2/itkImageFileReader.h:24:
In file included from /usr/local/include/ITK-5.2/itkImageIOBase.h:30:
In file included from /usr/local/include/ITK-5.2/itkSymmetricSecondRankTensor.h:28:
In file included from /usr/local/include/ITK-5.2/itkMatrix.h:25:
/usr/local/include/ITK-5.2/vnl/vnl_matrix_fixed.hxx:787:37: error: expected unqualified-id
std::cerr << char(vnl_math::isfinite(this->data[i][ j]) ? '-' : '*');
^
/Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk/usr/include/math.h:155:5: note: expanded from macro 'isfinite'
( sizeof(x) == sizeof(float) ? __inline_isfinitef((float)(x))
^
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/src/Vtk.cc:22:
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/include/mirtk/Vtk.h:33:
In file included from /usr/local/include/vtk-9.2/vtkPolyData.h:66:
In file included from /usr/local/include/vtk-9.2/vtkPointSet.h:58:
In file included from /usr/local/include/vtk-9.2/vtkCellTypes.h:44:
In file included from /usr/local/include/vtk-9.2/vtkIdTypeArray.h:27:
In file included from /usr/local/include/vtk-9.2/vtkAOSDataArrayTemplate.h:38:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.h:443:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.txx:21:
/usr/local/include/vtk-9.2/vtkMath.h:2102:15: error: expected unqualified-id
return std::isinf(x);
^
/usr/local/include/math.h:160:5: note: expanded from macro 'isinf'
( sizeof(x) == sizeof(float) ? __inline_isinff((float)(x))
^
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/src/Vtk.cc:22:
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/include/mirtk/Vtk.h:33:
In file included from /usr/local/include/vtk-9.2/vtkPolyData.h:66:
In file included from /usr/local/include/vtk-9.2/vtkPointSet.h:58:
In file included from /usr/local/include/vtk-9.2/vtkCellTypes.h:44:
In file included from /usr/local/include/vtk-9.2/vtkIdTypeArray.h:27:
In file included from /usr/local/include/vtk-9.2/vtkAOSDataArrayTemplate.h:38:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.h:443:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.txx:21:
/usr/local/include/vtk-9.2/vtkMath.h:2115:15: error: expected unqualified-id
return std::isnan(x);
^
/usr/local/include/math.h:165:5: note: expanded from macro 'isnan'
( sizeof(x) == sizeof(float) ? __inline_isnanf((float)(x))
^
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/src/Vtk.cc:22:
In file included from /Users/parinazbabaeeghazvini/Documents/MIRTK/Modules/Common/include/mirtk/Vtk.h:33:
In file included from /usr/local/include/vtk-9.2/vtkPolyData.h:66:
In file included from /usr/local/include/vtk-9.2/vtkPointSet.h:58:
In file included from /usr/local/include/vtk-9.2/vtkCellTypes.h:44:
In file included from /usr/local/include/vtk-9.2/vtkIdTypeArray.h:27:
In file included from /usr/local/include/vtk-9.2/vtkAOSDataArrayTemplate.h:38:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.h:443:
In file included from /usr/local/include/vtk-9.2/vtkGenericDataArray.txx:21:
/usr/local/include/vtk-9.2/vtkMath.h:2128:15: error: expected unqualified-id
return std::isfinite(x);
^
/usr/local/include/math.h:155:5: note: expanded from macro 'isfinite'
( sizeof(x) == sizeof(float) ? __inline_isfinitef((float)(x))
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
11 errors generated.
make[2]: *** [Modules/Common/src/CMakeFiles/LibCommon.dir/Vtk.cc.o] Error 1
make[1]: *** [Modules/Common/src/CMakeFiles/LibCommon.dir/all] Error 2
20 errors generated.
make[2]: *** [Packages/DrawEM/ThirdParty/ANTs/CMakeFiles/N4.dir/N4.cxx.o] Error 1
make[1]: *** [Packages/DrawEM/ThirdParty/ANTs/CMakeFiles/N4.dir/all] Error 2
make: *** [all] Error 2
I appreciate your help for solving the issue,
Best,
Parinaz.
The text was updated successfully, but these errors were encountered: