DESCRIPTION

Package: BWASPR
Title: Various R functions and scripts for the analyis of BWASP workflow output
Version: 0.0.0.9000
Authors@R: c(person("Volker", "Brendel", email = "vbrendel@indiana.edu", role = c("aut", "cre")),
             person("Shengyao", "Chen", email = "chenshe@indiana.edu", role = c("aut")))
Author: Volker Brendel [aut, cret],
        Shengyao Chen [aut]
Maintainer: Volker Brendel <vbrendel@indiana.edu>
Description: The BWASP workflow for BS-seq data analysis produces methylation
   site files *CpGhsm.mcalls and *CpGscd.mcalls.  BWASPR provides R functions
   and scripts to analysis the *mcalls files.
Depends: R (>= 3.3.2)
Imports:
   BiocGenerics,
   dplyr,
   genomation,
   GenomicRanges,
   ggplot2,
   gplots,
   grDevices,
   gridExtra,
   IRanges,
   methylKit,
   pastecs,
   R.devices,
   sqldf,
   S4Vectors,
   venneuler
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1