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visu_pars file parsing error #102

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archang opened this issue Feb 9, 2023 · 1 comment
Open

visu_pars file parsing error #102

archang opened this issue Feb 9, 2023 · 1 comment
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@archang
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archang commented Feb 9, 2023

Describe the bug
Running into this error for one of my bruker scan directories:

if dset._get_dim_info(visu_pars)[1] == 'spatial_only':
TypeError: 'NoneType' object is not subscriptable

By process of elimination, I determined that the offending scan is scan '1', belonging to a subject that has a total of 4 scans. I attached the visu_pars file here. It seems that both the 'VisuCoreDim' and 'VisuCoreDimDesc' are appropriate values (1 & 'spatial spatial', respectively), so I am not sure why I am getting this error.
visu_pars.txt
(Note that I only renamed 'visu_pars' to 'visu_pars.txt' for the purpose of uploading).

@dvm-shlee dvm-shlee pinned this issue Jun 17, 2023
@dvm-shlee dvm-shlee added the bug Something isn't working label Jul 1, 2023
@dvm-shlee dvm-shlee added this to the v0.4.0 release milestone Jul 1, 2023
@dvm-shlee dvm-shlee unpinned this issue Jul 1, 2023
@dvm-shlee
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@archang Sorry for the delay—it's been over a year since this issue was posted. Could you please confirm if you're still experiencing this problem with the latest update? If the issue persists, could you provide a 2dseq file for testing? This would help me verify if the updated module can handle it. If you have concerns about sharing the file publicly, feel free to email it to me directly at [email protected].

@dvm-shlee dvm-shlee moved this to In Progress in BrkRaw v0.4 May 15, 2024
@dvm-shlee dvm-shlee self-assigned this May 15, 2024
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