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Revise chr6 sub-selector step for samtools view with bed file #10

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AndrewPHodges opened this issue Jan 13, 2023 · 1 comment
Open

Revise chr6 sub-selector step for samtools view with bed file #10

AndrewPHodges opened this issue Jan 13, 2023 · 1 comment

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@AndrewPHodges
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@AndrewPHodges
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Modified current selector as new 2ndary function which will execute pysam.view using the hg38.bed. If this fails (e.g. format output not compatible with later steps), will revert to command-line samtools view -bo * version.

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