2-Layer-MLP-sklearn.ipynb

{
 "cells": [
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "Trying to install sklearn 0.18 using pip and run the neural network MLP\n",
    "\n",
    "note:  can't use anaconda for local packages\n",
    "\n",
    "http://stackoverflow.com/questions/33568244/upgrade-to-dev-version-of-scikit-learn-on-anaconda\n",
    "\n",
    "\n",
    "I can build and install from source on the Mac , but it fails to link something at runtime\n",
    "\n",
    "    sklearn Library not loaded: libmkl_intel_lp64.dylib\n",
    "        \n",
    "a clues from Google i have not explored and tried yet\n",
    "\n",
    "https://groups.google.com/a/continuum.io/forum/#!topic/anaconda/F8Q-8xyvrks\n",
    "<pre>\n",
    "\"it turned out to be a trivial linking issue.\n",
    "Don't ask me why but something seems to have messed up my paths.\n",
    "I fixed the issue on my box with some brute force.\n",
    "Symbolically linking all anaconda libraries into my homebrew library folder did the trick.\n",
    "for lib in ~/anaconda/lib/*; do ln -s $lib /usr/local/lib/$(basename $lib); done\"\n",
    "</pre>"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2016-06-08T07:37:26.457580",
     "start_time": "2016-06-08T07:37:26.377012"
    },
    "collapsed": false
   },
   "outputs": [
    {
     "ename": "ImportError",
     "evalue": "dlopen(/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise_fast.so, 2): Library not loaded: libmkl_intel_lp64.dylib\n  Referenced from: /Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise_fast.so\n  Reason: image not found",
     "output_type": "error",
     "traceback": [
      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
      "\u001b[0;31mImportError\u001b[0m                               Traceback (most recent call last)",
      "\u001b[0;32m<ipython-input-6-ce40b82badf7>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m      1\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m----> 2\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mneural_network\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/neural_network/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m      8\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mrbm\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mBernoulliRBM\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      9\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 10\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mmultilayer_perceptron\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mMLPClassifier\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     11\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mmultilayer_perceptron\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mMLPRegressor\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     12\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/neural_network/multilayer_perceptron.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     17\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_base\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mACTIVATIONS\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mDERIVATIVES\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mLOSS_FUNCTIONS\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     18\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_stochastic_optimizers\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mSGDOptimizer\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mAdamOptimizer\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 19\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mmodel_selection\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mtrain_test_split\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     20\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mexternals\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msix\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     21\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpreprocessing\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mLabelBinarizer\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/model_selection/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mBaseCrossValidator\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m      2\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mKFold\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      3\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mLabelKFold\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      4\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mStratifiedKFold\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      5\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mLeaveOneLabelOut\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/model_selection/_split.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     33\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mfixes\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msignature\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     34\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mbase\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m_pprint\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 35\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mgaussian_process\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mkernels\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mKernel\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0mGPKernel\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     36\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     37\u001b[0m __all__ = ['BaseCrossValidator',\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/gaussian_process/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     11\u001b[0m \"\"\"\n\u001b[1;32m     12\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 13\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mgpr\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mGaussianProcessRegressor\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     14\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mgpc\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mGaussianProcessClassifier\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     15\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mkernels\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/gaussian_process/gpr.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     13\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     14\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mbase\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mBaseEstimator\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mRegressorMixin\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mclone\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 15\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mgaussian_process\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mkernels\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mRBF\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mConstantKernel\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0mC\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     16\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcheck_random_state\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     17\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mvalidation\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcheck_X_y\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mcheck_array\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/gaussian_process/kernels.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     28\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0mscipy\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mspatial\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdistance\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mpdist\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mcdist\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msquareform\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     29\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 30\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mmetrics\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpairwise\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mpairwise_kernels\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     31\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mexternals\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msix\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     32\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mbase\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mclone\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     31\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mclassification\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mbrier_score_loss\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     32\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 33\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcluster\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     34\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mcluster\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0madjusted_mutual_info_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     35\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mcluster\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0madjusted_rand_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/cluster/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     17\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0msupervised\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mv_measure_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     18\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0msupervised\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mentropy\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 19\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0munsupervised\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msilhouette_samples\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     20\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0munsupervised\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msilhouette_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     21\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mbicluster\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mconsensus_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/cluster/unsupervised.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m      9\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcheck_random_state\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     10\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcheck_X_y\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 11\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpairwise\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mpairwise_distances\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     12\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpreprocessing\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mLabelEncoder\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     13\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     27\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mexternals\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mjoblib\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mparallel\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcpu_count\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     28\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 29\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mpairwise_fast\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m_chi2_kernel_fast\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0m_sparse_manhattan\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     30\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     31\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;31mImportError\u001b[0m: dlopen(/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise_fast.so, 2): Library not loaded: libmkl_intel_lp64.dylib\n  Referenced from: /Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise_fast.so\n  Reason: image not found"
     ]
    }
   ],
   "source": [
    "import sklearn\n",
    "from sklearn import neural_network"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": []
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2016-06-07T17:12:57.212980",
     "start_time": "2016-06-07T17:12:56.770884"
    },
    "collapsed": false
   },
   "outputs": [],
   "source": [
    "!pip show scikit-learn"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2016-06-07T17:12:11.724720",
     "start_time": "2016-06-07T17:12:11.722811"
    }
   },
   "source": [
    "http://scikit-learn.org/dev/auto_examples/classification/plot_classifier_comparison.html#example-classification-plot-classifier-comparison-py"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2016-06-07T17:41:30.725475",
     "start_time": "2016-06-07T17:41:29.496075"
    },
    "collapsed": false
   },
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/matplotlib/font_manager.py:273: UserWarning: Matplotlib is building the font cache using fc-list. This may take a moment.\n",
      "  warnings.warn('Matplotlib is building the font cache using fc-list. This may take a moment.')\n"
     ]
    },
    {
     "ename": "ImportError",
     "evalue": "dlopen(/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise_fast.so, 2): Library not loaded: libmkl_intel_lp64.dylib\n  Referenced from: /Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise_fast.so\n  Reason: image not found",
     "output_type": "error",
     "traceback": [
      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
      "\u001b[0;31mImportError\u001b[0m                               Traceback (most recent call last)",
      "\u001b[0;32m<ipython-input-3-0065ddc88b0a>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m      3\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0mmatplotlib\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mcolors\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mListedColormap\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      4\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpreprocessing\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mStandardScaler\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m----> 5\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mneural_network\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mMLPClassifier\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/neural_network/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m      8\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mrbm\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mBernoulliRBM\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      9\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 10\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mmultilayer_perceptron\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mMLPClassifier\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     11\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mmultilayer_perceptron\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mMLPRegressor\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     12\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/neural_network/multilayer_perceptron.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     17\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_base\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mACTIVATIONS\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mDERIVATIVES\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mLOSS_FUNCTIONS\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     18\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_stochastic_optimizers\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mSGDOptimizer\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mAdamOptimizer\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 19\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mmodel_selection\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mtrain_test_split\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     20\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mexternals\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msix\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     21\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpreprocessing\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mLabelBinarizer\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/model_selection/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mBaseCrossValidator\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m      2\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mKFold\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      3\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mLabelKFold\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      4\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mStratifiedKFold\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      5\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_split\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mLeaveOneLabelOut\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/model_selection/_split.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     33\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mfixes\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msignature\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     34\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mbase\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m_pprint\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 35\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mgaussian_process\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mkernels\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mKernel\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0mGPKernel\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     36\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     37\u001b[0m __all__ = ['BaseCrossValidator',\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/gaussian_process/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     11\u001b[0m \"\"\"\n\u001b[1;32m     12\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 13\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mgpr\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mGaussianProcessRegressor\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     14\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mgpc\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mGaussianProcessClassifier\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     15\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mkernels\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/gaussian_process/gpr.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     13\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     14\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mbase\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mBaseEstimator\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mRegressorMixin\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mclone\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 15\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mgaussian_process\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mkernels\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mRBF\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mConstantKernel\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0mC\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     16\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcheck_random_state\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     17\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mvalidation\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcheck_X_y\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mcheck_array\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/gaussian_process/kernels.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     28\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0mscipy\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mspatial\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdistance\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mpdist\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mcdist\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msquareform\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     29\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 30\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mmetrics\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpairwise\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mpairwise_kernels\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     31\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mexternals\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msix\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     32\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mbase\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mclone\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     31\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mclassification\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mbrier_score_loss\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     32\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 33\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcluster\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     34\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mcluster\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0madjusted_mutual_info_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     35\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mcluster\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0madjusted_rand_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/cluster/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     17\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0msupervised\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mv_measure_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     18\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0msupervised\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mentropy\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 19\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0munsupervised\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msilhouette_samples\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     20\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0munsupervised\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msilhouette_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     21\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mbicluster\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mconsensus_score\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/cluster/unsupervised.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m      9\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcheck_random_state\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     10\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcheck_X_y\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 11\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpairwise\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mpairwise_distances\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     12\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpreprocessing\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mLabelEncoder\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     13\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m     27\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mexternals\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mjoblib\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mparallel\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcpu_count\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     28\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 29\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mpairwise_fast\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m_chi2_kernel_fast\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0m_sparse_manhattan\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     30\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     31\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;31mImportError\u001b[0m: dlopen(/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise_fast.so, 2): Library not loaded: libmkl_intel_lp64.dylib\n  Referenced from: /Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/sklearn/metrics/pairwise_fast.so\n  Reason: image not found"
     ]
    }
   ],
   "source": [
    "import numpy as np\n",
    "import matplotlib.pyplot as plt\n",
    "from matplotlib.colors import ListedColormap\n",
    "from sklearn.preprocessing import StandardScaler\n",
    "from sklearn.neural_network import MLPClassifier\n"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "?? Where is the MLP ?  "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2016-06-07T18:15:12.156367",
     "start_time": "2016-06-07T18:15:12.137228"
    },
    "collapsed": false
   },
   "outputs": [
    {
     "data": {
      "text/plain": [
       "'0.18.dev0'"
      ]
     },
     "execution_count": 4,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "sklearn.__version__"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {
    "ExecuteTime": {
     "end_time": "2016-06-07T18:15:13.593714",
     "start_time": "2016-06-07T18:15:13.591177"
    },
    "collapsed": false
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "['', '/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/six-1.10.0-py2.7.egg', '/Users/charlesmartin14/anaconda2/lib/python27.zip', '/Users/charlesmartin14/anaconda2/lib/python2.7', '/Users/charlesmartin14/anaconda2/lib/python2.7/plat-darwin', '/Users/charlesmartin14/anaconda2/lib/python2.7/plat-mac', '/Users/charlesmartin14/anaconda2/lib/python2.7/plat-mac/lib-scriptpackages', '/Users/charlesmartin14/anaconda2/lib/python2.7/lib-tk', '/Users/charlesmartin14/anaconda2/lib/python2.7/lib-old', '/Users/charlesmartin14/anaconda2/lib/python2.7/lib-dynload', '/Users/charlesmartin14/.local/lib/python2.7/site-packages', '/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/Sphinx-1.3.5-py2.7.egg', '/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages', '/Users/charlesmartin14/anaconda2/lib/python2.7/site-packages/aeosa', '/Users/charlesmartin14/.local/lib/python2.7/site-packages/IPython/extensions', '/Users/charlesmartin14/.ipython']\n"
     ]
    }
   ],
   "source": [
    "import sys\n",
    "print (sys.path)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": []
  }
 ],
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