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whbo-simple-non-classified.obo
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whbo-simple-non-classified.obo
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format-version: 1.2
data-version: pcl/releases/2025-01-06/whbo-simple-non-classified.owl
idspace: custom http://n2o.neo/custom/
idspace: dc http://purl.org/dc/elements/1.1/
idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl#
idspace: skos http://www.w3.org/2004/02/skos/core#
idspace: terms http://purl.org/dc/terms/
ontology: pcl/whbo-simple-non-classified
property_value: dc:description "A data-driven cell-type ontology of the human brain" xsd:string
property_value: owl:versionInfo "2025-01-06" xsd:string
property_value: terms:license http://creativecommons.org/licenses/by/4.0/
property_value: terms:title "Whole Human Brain Ontology" xsd:string
[Term]
id: PCL:0051005
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SRGN (Hsap), HIF1A-AS3 (Hsap). The soma of these cells can be found in the spinal cord, pons, myelencephalon. The reference data for this cell type is CS202210140_5." [DOI:10.1126/science.add7046]
synonym: "Mgl_4" EXACT []
synonym: "SRGN (Hsap), HIF1A-AS3 (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000122862 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000258667 ! expresses
relationship: RO:0015004 PCL:0052505 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_4 (Human)" xsd:string
property_value: PCL:0010058 "HIF1A-AS3 (Hsap)" xsd:string
property_value: PCL:0010058 "SRGN (Hsap)" xsd:string
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 26.0%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 13.2%."}
property_value: PCL:0010063 UBERON:0002240 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Spinal cord: 31.8%."}
property_value: skos:prefLabel "Mgl_4" xsd:string
[Term]
id: PCL:0051006
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of APBB1IP (Hsap), TTR (Hsap). The soma of these cells can be found in the hippocampal formation, myelencephalon, basal forebrain. The reference data for this cell type is CS202210140_6." [DOI:10.1126/science.add7046]
synonym: "APBB1IP (Hsap), TTR (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
synonym: "Mgl_5" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000077420 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000118271 ! expresses
relationship: RO:0015004 PCL:0052506 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_5 (Human)" xsd:string
property_value: PCL:0010058 "APBB1IP (Hsap)" xsd:string
property_value: PCL:0010058 "TTR (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 40.4%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 20.1%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 29.6%."}
property_value: skos:prefLabel "Mgl_5" xsd:string
[Term]
id: PCL:0051007
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SCIN (Hsap), ITGAX (Hsap), LINC00278 (Hsap). The soma of these cells can be found in the hippocampal formation, basal forebrain, thalamus. The reference data for this cell type is CS202210140_7." [DOI:10.1126/science.add7046]
synonym: "Mgl_6" EXACT []
synonym: "SCIN (Hsap), ITGAX (Hsap), LINC00278 (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000006747 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000140678 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000231535 ! expresses
relationship: RO:0015004 PCL:0052507 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_6 (Human)" xsd:string
property_value: PCL:0010058 "ITGAX (Hsap)" xsd:string
property_value: PCL:0010058 "LINC00278 (Hsap)" xsd:string
property_value: PCL:0010058 "SCIN (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 25.1%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 15.2%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 11.0%."}
property_value: skos:prefLabel "Mgl_6" xsd:string
[Term]
id: PCL:0051008
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of CX3CR1 (Hsap), OLR1 (Hsap), LINC02712 (Hsap). The soma of these cells can be found in the basal forebrain, mesencephalon, pons. The reference data for this cell type is CS202210140_8." [DOI:10.1126/science.add7046]
synonym: "CX3CR1 (Hsap), OLR1 (Hsap), LINC02712 (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
synonym: "Mgl_7" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000168329 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000173391 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000273409 ! expresses
relationship: RO:0015004 PCL:0052508 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_7 (Human)" xsd:string
property_value: PCL:0010058 "CX3CR1 (Hsap)" xsd:string
property_value: PCL:0010058 "LINC02712 (Hsap)" xsd:string
property_value: PCL:0010058 "OLR1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 32.0%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 19.4%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 12.5%."}
property_value: skos:prefLabel "Mgl_7" xsd:string
[Term]
id: PCL:0051009
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of CX3CR1 (Hsap), CCDC26 (Hsap), LNCAROD (Hsap). The soma of these cells can be found in the hippocampal formation, mesencephalon, basal forebrain. The reference data for this cell type is CS202210140_9." [DOI:10.1126/science.add7046]
synonym: "CX3CR1 (Hsap), CCDC26 (Hsap), LNCAROD (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
synonym: "Mgl_8" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000168329 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000229140 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000231131 ! expresses
relationship: RO:0015004 PCL:0052509 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_8 (Human)" xsd:string
property_value: PCL:0010058 "CCDC26 (Hsap)" xsd:string
property_value: PCL:0010058 "CX3CR1 (Hsap)" xsd:string
property_value: PCL:0010058 "LNCAROD (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 19.2%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 11.1%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 18.4%."}
property_value: skos:prefLabel "Mgl_8" xsd:string
[Term]
id: PCL:0051010
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of CX3CR1 (Hsap), AIF1 (Hsap), LINC02712 (Hsap). The soma of these cells can be found in the cerebral cortex, mesencephalon, hippocampal formation. The reference data for this cell type is CS202210140_10." [DOI:10.1126/science.add7046]
synonym: "CX3CR1 (Hsap), AIF1 (Hsap), LINC02712 (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
synonym: "Mgl_9" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000168329 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000204472 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000273409 ! expresses
relationship: RO:0015004 PCL:0052510 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_9 (Human)" xsd:string
property_value: PCL:0010058 "AIF1 (Hsap)" xsd:string
property_value: PCL:0010058 "CX3CR1 (Hsap)" xsd:string
property_value: PCL:0010058 "LINC02712 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 27.2%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 15.0%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 16.6%."}
property_value: skos:prefLabel "Mgl_9" xsd:string
[Term]
id: PCL:0051011
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of DOCK8 (Hsap), P2RY12 (Hsap), LNCAROD (Hsap). The soma of these cells can be found in the basal forebrain, mesencephalon, cerebral cortex. The reference data for this cell type is CS202210140_11." [DOI:10.1126/science.add7046]
synonym: "DOCK8 (Hsap), P2RY12 (Hsap), LNCAROD (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
synonym: "Mgl_10" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000107099 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000169313 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000231131 ! expresses
relationship: RO:0015004 PCL:0052511 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_10 (Human)" xsd:string
property_value: PCL:0010058 "DOCK8 (Hsap)" xsd:string
property_value: PCL:0010058 "LNCAROD (Hsap)" xsd:string
property_value: PCL:0010058 "P2RY12 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 10.3%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 27.7%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 22.1%."}
property_value: skos:prefLabel "Mgl_10" xsd:string
[Term]
id: PCL:0051012
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of P2RY12 (Hsap), LINC02642 (Hsap), LINC02712 (Hsap). The soma of these cells can be found in the cerebral cortex, hippocampal formation, thalamus. The reference data for this cell type is CS202210140_12." [DOI:10.1126/science.add7046]
synonym: "Mgl_11" EXACT []
synonym: "P2RY12 (Hsap), LINC02642 (Hsap), LINC02712 (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000169313 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000232591 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000273409 ! expresses
relationship: RO:0015004 PCL:0052512 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_11 (Human)" xsd:string
property_value: PCL:0010058 "LINC02642 (Hsap)" xsd:string
property_value: PCL:0010058 "LINC02712 (Hsap)" xsd:string
property_value: PCL:0010058 "P2RY12 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 37.4%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 24.2%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 11.1%."}
property_value: skos:prefLabel "Mgl_11" xsd:string
[Term]
id: PCL:0051013
def: "A microglial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of F13A1 (Hsap), MRC1 (Hsap). The soma of these cells can be found in the basal forebrain, cerebral cortex, cerebellum. The reference data for this cell type is CS202210140_13." [DOI:10.1126/science.add7046]
synonym: "F13A1 (Hsap), MRC1 (Hsap) expressing microglial cell of brain (Homo sapiens)" EXACT []
synonym: "Mgl_12" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000124491 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000260314 ! expresses
relationship: RO:0015004 PCL:0052513 ! has characterizing marker set
property_value: IAO:0000028 "Mgl_12 (Human)" xsd:string
property_value: PCL:0010058 "F13A1 (Hsap)" xsd:string
property_value: PCL:0010058 "MRC1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 14.0%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 29.4%."}
property_value: PCL:0010063 HBA:4696 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebellum: 12.2%."}
property_value: skos:prefLabel "Mgl_12" xsd:string
[Term]
id: PCL:0051014
def: "A brain vascular cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of PLVAP (Hsap). The soma of these cells can be found in the basal forebrain, myelencephalon. The reference data for this cell type is CS202210140_14." [DOI:10.1126/science.add7046]
synonym: "PLVAP (Hsap) expressing brain vascular cell of brain (Homo sapiens)" EXACT []
synonym: "VendPLVAP_13" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000130300 ! expresses
relationship: RO:0015004 PCL:0052514 ! has characterizing marker set
property_value: IAO:0000028 "VendPLVAP_13 (Human)" xsd:string
property_value: PCL:0010058 "PLVAP (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 74.0%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 23.3%."}
property_value: skos:prefLabel "VendPLVAP_13" xsd:string
[Term]
id: PCL:0051015
def: "A brain vascular cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SEMA3G (Hsap), HERC2P3 (Hsap). The soma of these cells can be found in the hippocampal formation, cerebral cortex, thalamus. The reference data for this cell type is CS202210140_15." [DOI:10.1126/science.add7046]
synonym: "SEMA3G (Hsap), HERC2P3 (Hsap) expressing brain vascular cell of brain (Homo sapiens)" EXACT []
synonym: "VendAC_14" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000010319 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000180229 ! expresses
relationship: RO:0015004 PCL:0052515 ! has characterizing marker set
property_value: IAO:0000028 "VendAC_14 (Human)" xsd:string
property_value: PCL:0010058 "HERC2P3 (Hsap)" xsd:string
property_value: PCL:0010058 "SEMA3G (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 23.3%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 23.8%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 10.3%."}
property_value: skos:prefLabel "VendAC_14" xsd:string
[Term]
id: PCL:0051016
def: "A capillary endothelial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of MECOM (Hsap), ABCG2 (Hsap), HMCN1 (Hsap). The soma of these cells can be found in the cerebral cortex, hippocampal formation, thalamus. The reference data for this cell type is CS202210140_16." [DOI:10.1126/science.add7046]
synonym: "MECOM (Hsap), ABCG2 (Hsap), HMCN1 (Hsap) expressing capillary endothelial cell of brain (Homo sapiens)" EXACT []
synonym: "VendC_15" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000085276 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000118777 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000143341 ! expresses
relationship: RO:0015004 PCL:0052516 ! has characterizing marker set
property_value: IAO:0000028 "VendC_15 (Human)" xsd:string
property_value: PCL:0010058 "ABCG2 (Hsap)" xsd:string
property_value: PCL:0010058 "HMCN1 (Hsap)" xsd:string
property_value: PCL:0010058 "MECOM (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 23.2%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 15.7%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 15.3%."}
property_value: skos:prefLabel "VendC_15" xsd:string
[Term]
id: PCL:0051017
def: "A capillary endothelial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of MECOM (Hsap), TRPM6 (Hsap). The soma of these cells can be found in the cerebral cortex, hippocampal formation. The reference data for this cell type is CS202210140_17." [DOI:10.1126/science.add7046]
synonym: "MECOM (Hsap), TRPM6 (Hsap) expressing capillary endothelial cell of brain (Homo sapiens)" EXACT []
synonym: "VendVC_16" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000085276 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000119121 ! expresses
relationship: RO:0015004 PCL:0052517 ! has characterizing marker set
property_value: IAO:0000028 "VendVC_16 (Human)" xsd:string
property_value: PCL:0010058 "MECOM (Hsap)" xsd:string
property_value: PCL:0010058 "TRPM6 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 25.5%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 17.8%."}
property_value: skos:prefLabel "VendVC_16" xsd:string
[Term]
id: PCL:0051018
def: "A vein endothelial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of IL1R1 (Hsap), SRGN (Hsap). The soma of these cells can be found in the hypothalamus, myelencephalon, pons. The reference data for this cell type is CS202210140_18." [DOI:10.1126/science.add7046]
synonym: "IL1R1 (Hsap), SRGN (Hsap) expressing vein endothelial cell of brain (Homo sapiens)" EXACT []
synonym: "VendV_17" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000115594 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000122862 ! expresses
relationship: RO:0015004 PCL:0052518 ! has characterizing marker set
property_value: IAO:0000028 "VendV_17 (Human)" xsd:string
property_value: PCL:0010058 "IL1R1 (Hsap)" xsd:string
property_value: PCL:0010058 "SRGN (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4540 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hypothalamus: 26.7%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 15.8%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 21.8%."}
property_value: skos:prefLabel "VendV_17" xsd:string
[Term]
id: PCL:0051019
def: "A endothelial cell of artery of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of MECOM (Hsap), MGP (Hsap). The soma of these cells can be found in the cerebral cortex, myelencephalon, thalamus. The reference data for this cell type is CS202210140_19." [DOI:10.1126/science.add7046]
synonym: "MECOM (Hsap), MGP (Hsap) expressing endothelial cell of artery of brain (Homo sapiens)" EXACT []
synonym: "VendA_18" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000085276 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000111341 ! expresses
relationship: RO:0015004 PCL:0052519 ! has characterizing marker set
property_value: IAO:0000028 "VendA_18 (Human)" xsd:string
property_value: PCL:0010058 "MECOM (Hsap)" xsd:string
property_value: PCL:0010058 "MGP (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 23.3%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 14.6%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 16.4%."}
property_value: skos:prefLabel "VendA_18" xsd:string
[Term]
id: PCL:0051020
def: "A brain vascular cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of MECOM (Hsap), ACTA2 (Hsap). The soma of these cells can be found in the thalamus, mesencephalon, myelencephalon. The reference data for this cell type is CS202210140_20." [DOI:10.1126/science.add7046]
synonym: "MECOM (Hsap), ACTA2 (Hsap) expressing brain vascular cell of brain (Homo sapiens)" EXACT []
synonym: "Vsmc_19" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000085276 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000107796 ! expresses
relationship: RO:0015004 PCL:0052520 ! has characterizing marker set
property_value: IAO:0000028 "Vsmc_19 (Human)" xsd:string
property_value: PCL:0010058 "ACTA2 (Hsap)" xsd:string
property_value: PCL:0010058 "MECOM (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 28.4%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 12.2%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 11.8%."}
property_value: skos:prefLabel "Vsmc_19" xsd:string
[Term]
id: PCL:0051021
def: "A smooth muscle cell of the brain vasculature of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of ACTA2 (Hsap), TAGLN (Hsap). The soma of these cells can be found in the thalamus, cerebral cortex, myelencephalon. The reference data for this cell type is CS202210140_21." [DOI:10.1126/science.add7046]
synonym: "ACTA2 (Hsap), TAGLN (Hsap) expressing smooth muscle cell of the brain vasculature of brain (Homo sapiens)" EXACT []
synonym: "Vsmc_20" EXACT []
is_a: CL:0002590 {xref="https://doi.org/10.1002/dvdy.1200", xref="https://doi.org/10.1016/j.celrep.2017.05.019", xref="https://doi.org/10.1038/nn.4288", xref="https://doi.org/10.1096/fj.02-0340fje", comment="Inferred from expression of: PDGFRB, ACTA2, MYH11"}
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000107796 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000149591 ! expresses
relationship: RO:0015004 PCL:0052521 ! has characterizing marker set
property_value: IAO:0000028 "Vsmc_20 (Human)" xsd:string
property_value: PCL:0010058 "ACTA2 (Hsap)" xsd:string
property_value: PCL:0010058 "TAGLN (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 13.7%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 21.8%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 12.4%."}
property_value: skos:prefLabel "Vsmc_20" xsd:string
[Term]
id: PCL:0051022
def: "A pericyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of RERGL (Hsap), NDUFA4L2 (Hsap). The soma of these cells can be found in the thalamus, pons. The reference data for this cell type is CS202210140_22." [DOI:10.1126/science.add7046]
synonym: "Per_21" EXACT []
synonym: "RERGL (Hsap), NDUFA4L2 (Hsap) expressing pericyte of brain (Homo sapiens)" EXACT []
is_a: CL:0000669 {xref="https://doi.org/10.1016/j.celrep.2017.05.019", xref="https://doi.org/10.1038/nn.4288", xref="https://doi.org/10.1096/fj.02-0340fje", comment="Inferred from expression of: PDGFRB, CSPG4"}
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000111404 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000185633 ! expresses
relationship: RO:0015004 PCL:0052522 ! has characterizing marker set
property_value: IAO:0000028 "Per_21 (Human)" xsd:string
property_value: PCL:0010058 "NDUFA4L2 (Hsap)" xsd:string
property_value: PCL:0010058 "RERGL (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 28.3%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 17.9%."}
property_value: skos:prefLabel "Per_21" xsd:string
[Term]
id: PCL:0051023
def: "A pericyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SLC19A1 (Hsap), CARMN (Hsap). The soma of these cells can be found in the thalamus, cerebral cortex, basal forebrain. The reference data for this cell type is CS202210140_23." [DOI:10.1126/science.add7046]
synonym: "Per_22" EXACT []
synonym: "SLC19A1 (Hsap), CARMN (Hsap) expressing pericyte of brain (Homo sapiens)" EXACT []
is_a: CL:0000669 {xref="https://doi.org/10.1016/j.celrep.2017.05.019", xref="https://doi.org/10.1038/nn.4288", xref="https://doi.org/10.1096/fj.02-0340fje", comment="Inferred from expression of: PDGFRB, CSPG4"}
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000173638 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000249669 ! expresses
relationship: RO:0015004 PCL:0052523 ! has characterizing marker set
property_value: IAO:0000028 "Per_22 (Human)" xsd:string
property_value: PCL:0010058 "CARMN (Hsap)" xsd:string
property_value: PCL:0010058 "SLC19A1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 15.9%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 10.2%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 34.2%."}
property_value: skos:prefLabel "Per_22" xsd:string
[Term]
id: PCL:0051024
def: "A brain vascular cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SLC6A13 (Hsap), ASPN (Hsap), SLC6A12 (Hsap). The soma of these cells can be found in the thalamus, cerebral cortex, basal forebrain. The reference data for this cell type is CS202210140_24." [DOI:10.1126/science.add7046]
synonym: "Per_23" EXACT []
synonym: "SLC6A13 (Hsap), ASPN (Hsap), SLC6A12 (Hsap) expressing brain vascular cell of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000010379 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000106819 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000111181 ! expresses
relationship: RO:0015004 PCL:0052524 ! has characterizing marker set
property_value: IAO:0000028 "Per_23 (Human)" xsd:string
property_value: PCL:0010058 "ASPN (Hsap)" xsd:string
property_value: PCL:0010058 "SLC6A12 (Hsap)" xsd:string
property_value: PCL:0010058 "SLC6A13 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 25.0%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 10.7%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 48.8%."}
property_value: skos:prefLabel "Per_23" xsd:string
[Term]
id: PCL:0051025
def: "A fibroblast of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of BMP5 (Hsap), C7 (Hsap). The soma of these cells can be found in the basal forebrain, myelencephalon, hippocampal formation. The reference data for this cell type is CS202210140_25." [DOI:10.1126/science.add7046]
synonym: "BMP5 (Hsap), C7 (Hsap) expressing fibroblast of brain (Homo sapiens)" EXACT []
synonym: "Fbl_24" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000112175 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000112936 ! expresses
relationship: RO:0015004 PCL:0052525 ! has characterizing marker set
property_value: IAO:0000028 "Fbl_24 (Human)" xsd:string
property_value: PCL:0010058 "BMP5 (Hsap)" xsd:string
property_value: PCL:0010058 "C7 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 25.1%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 38.0%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 32.3%."}
property_value: skos:prefLabel "Fbl_24" xsd:string
[Term]
id: PCL:0051026
def: "A fibroblast of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of TBX18 (Hsap), LTBP2 (Hsap). The soma of these cells can be found in the thalamus, cerebral cortex, pons. The reference data for this cell type is CS202210140_26." [DOI:10.1126/science.add7046]
synonym: "Fbl_25" EXACT []
synonym: "TBX18 (Hsap), LTBP2 (Hsap) expressing fibroblast of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000112837 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000119681 ! expresses
relationship: RO:0015004 PCL:0052526 ! has characterizing marker set
property_value: IAO:0000028 "Fbl_25 (Human)" xsd:string
property_value: PCL:0010058 "LTBP2 (Hsap)" xsd:string
property_value: PCL:0010058 "TBX18 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 20.0%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 22.3%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 15.0%."}
property_value: skos:prefLabel "Fbl_25" xsd:string
[Term]
id: PCL:0051027
def: "A fibroblast of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SLC6A20 (Hsap), COL15A1 (Hsap). The soma of these cells can be found in the thalamus, basal forebrain, pons. The reference data for this cell type is CS202210140_27." [DOI:10.1126/science.add7046]
synonym: "Fbl_26" EXACT []
synonym: "SLC6A20 (Hsap), COL15A1 (Hsap) expressing fibroblast of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000163817 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000204291 ! expresses
relationship: RO:0015004 PCL:0052527 ! has characterizing marker set
property_value: IAO:0000028 "Fbl_26 (Human)" xsd:string
property_value: PCL:0010058 "COL15A1 (Hsap)" xsd:string
property_value: PCL:0010058 "SLC6A20 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 15.4%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 20.7%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 13.1%."}
property_value: skos:prefLabel "Fbl_26" xsd:string
[Term]
id: PCL:0051028
def: "A fibroblast of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of FMO2 (Hsap), ABCA8 (Hsap), LINC02147 (Hsap). The soma of these cells can be found in the thalamus, cerebral cortex, pons. The reference data for this cell type is CS202210140_28." [DOI:10.1126/science.add7046]
synonym: "Fbl_27" EXACT []
synonym: "FMO2 (Hsap), ABCA8 (Hsap), LINC02147 (Hsap) expressing fibroblast of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000094963 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000141338 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000249797 ! expresses
relationship: RO:0015004 PCL:0052528 ! has characterizing marker set
property_value: IAO:0000028 "Fbl_27 (Human)" xsd:string
property_value: PCL:0010058 "ABCA8 (Hsap)" xsd:string
property_value: PCL:0010058 "FMO2 (Hsap)" xsd:string
property_value: PCL:0010058 "LINC02147 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 15.0%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 34.3%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 13.3%."}
property_value: skos:prefLabel "Fbl_27" xsd:string
[Term]
id: PCL:0051029
def: "A fibroblast of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of C7 (Hsap), FBLN2 (Hsap), COL1A2 (Hsap). The soma of these cells can be found in the thalamus, cerebral cortex, pons. The reference data for this cell type is CS202210140_29." [DOI:10.1126/science.add7046]
synonym: "C7 (Hsap), FBLN2 (Hsap), COL1A2 (Hsap) expressing fibroblast of brain (Homo sapiens)" EXACT []
synonym: "Fbl_28" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000112936 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000163520 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000164692 ! expresses
relationship: RO:0015004 PCL:0052529 ! has characterizing marker set
property_value: IAO:0000028 "Fbl_28 (Human)" xsd:string
property_value: PCL:0010058 "C7 (Hsap)" xsd:string
property_value: PCL:0010058 "COL1A2 (Hsap)" xsd:string
property_value: PCL:0010058 "FBLN2 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 12.1%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 36.4%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 11.0%."}
property_value: skos:prefLabel "Fbl_28" xsd:string
[Term]
id: PCL:0051030
def: "A fibroblast of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SLC2A1 (Hsap), BMPR1B (Hsap), EBF2 (Hsap). The soma of these cells can be found in the myelencephalon, spinal cord. The reference data for this cell type is CS202210140_30." [DOI:10.1126/science.add7046]
synonym: "Fbl_29" EXACT []
synonym: "SLC2A1 (Hsap), BMPR1B (Hsap), EBF2 (Hsap) expressing fibroblast of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000117394 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000138696 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000221818 ! expresses
relationship: RO:0015004 PCL:0052530 ! has characterizing marker set
property_value: IAO:0000028 "Fbl_29 (Human)" xsd:string
property_value: PCL:0010058 "BMPR1B (Hsap)" xsd:string
property_value: PCL:0010058 "EBF2 (Hsap)" xsd:string
property_value: PCL:0010058 "SLC2A1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 41.3%."}
property_value: PCL:0010063 UBERON:0002240 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Spinal cord: 39.7%."}
property_value: skos:prefLabel "Fbl_29" xsd:string
[Term]
id: PCL:0051031
def: "A fibroblast of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SLC5A5 (Hsap), RP11-354K4.2 (Hsap). The soma of these cells can be found in the cerebral cortex, basal forebrain, myelencephalon. The reference data for this cell type is CS202210140_31." [DOI:10.1126/science.add7046]
synonym: "Fbl_30" EXACT []
synonym: "SLC5A5 (Hsap), RP11-354K4.2 (Hsap) expressing fibroblast of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000105641 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000271945 ! expresses
relationship: RO:0015004 PCL:0052531 ! has characterizing marker set
property_value: IAO:0000028 "Fbl_30 (Human)" xsd:string
property_value: PCL:0010058 "RP11-354K4.2 (Hsap)" xsd:string
property_value: PCL:0010058 "SLC5A5 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 35.3%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 29.7%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 10.6%."}
property_value: skos:prefLabel "Fbl_30" xsd:string
[Term]
id: PCL:0051032
def: "A arachnoid barrier cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of PTGDR (Hsap), BNC2 (Hsap). The soma of these cells can be found in the basal forebrain, myelencephalon, hypothalamus. The reference data for this cell type is CS202210140_32." [DOI:10.1126/science.add7046]
synonym: "Fbl_31" EXACT []
synonym: "PTGDR (Hsap), BNC2 (Hsap) expressing arachnoid barrier cell of brain (Homo sapiens)" EXACT []
is_a: CL:4023097 {xref="https://doi.org/10.1016/j.devcel.2020.06.009", comment="Inferred from expression of: AQP4, GDF10, GABRG3, WIF1, LGR6"}
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000168229 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000173068 ! expresses
relationship: RO:0015004 PCL:0052532 ! has characterizing marker set
property_value: IAO:0000028 "Fbl_31 (Human)" xsd:string
property_value: PCL:0010058 "BNC2 (Hsap)" xsd:string
property_value: PCL:0010058 "PTGDR (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 47.3%."}
property_value: PCL:0010063 HBA:4540 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hypothalamus: 12.4%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 20.3%."}
property_value: skos:prefLabel "Fbl_31" xsd:string
[Term]
id: PCL:0051033
def: "A oligodendrocyte precursor cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of MROH9 (Hsap), RP1-45C12.1 (Hsap). The soma of these cells can be found in the hypothalamus, thalamus. The reference data for this cell type is CS202210140_33." [DOI:10.1126/science.add7046]
synonym: "MROH9 (Hsap), RP1-45C12.1 (Hsap) expressing oligodendrocyte precursor cell of brain (Homo sapiens)" EXACT []
synonym: "OPC_32" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000117501 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000231424 ! expresses
relationship: RO:0015004 PCL:0052533 ! has characterizing marker set
property_value: IAO:0000028 "OPC_32 (Human)" xsd:string
property_value: PCL:0010058 "MROH9 (Hsap)" xsd:string
property_value: PCL:0010058 "RP1-45C12.1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 16.6%."}
property_value: PCL:0010063 HBA:4540 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hypothalamus: 54.7%."}
property_value: skos:prefLabel "OPC_32" xsd:string
[Term]
id: PCL:0051034
def: "A oligodendrocyte precursor cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of OLIG1 (Hsap), APOD (Hsap), RP1-45C12.1 (Hsap). The soma of these cells can be found in the pons, mesencephalon, thalamus. The reference data for this cell type is CS202210140_34." [DOI:10.1126/science.add7046]
synonym: "OLIG1 (Hsap), APOD (Hsap), RP1-45C12.1 (Hsap) expressing oligodendrocyte precursor cell of brain (Homo sapiens)" EXACT []
synonym: "OPC_33" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000184221 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000189058 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000231424 ! expresses
relationship: RO:0015004 PCL:0052534 ! has characterizing marker set
property_value: IAO:0000028 "OPC_33 (Human)" xsd:string
property_value: PCL:0010058 "APOD (Hsap)" xsd:string
property_value: PCL:0010058 "OLIG1 (Hsap)" xsd:string
property_value: PCL:0010058 "RP1-45C12.1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 19.2%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 22.9%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 23.8%."}
property_value: skos:prefLabel "OPC_33" xsd:string
[Term]
id: PCL:0051035
def: "A oligodendrocyte precursor cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of OLIG1 (Hsap), RP4-668E10.4 (Hsap), RP11-197H3.1 (Hsap). The soma of these cells can be found in the hippocampal formation, cerebral cortex, amygdala. The reference data for this cell type is CS202210140_35." [DOI:10.1126/science.add7046]
synonym: "OLIG1 (Hsap), RP4-668E10.4 (Hsap), RP11-197H3.1 (Hsap) expressing oligodendrocyte precursor cell of brain (Homo sapiens)" EXACT []
synonym: "OPC_34" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000184221 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000278254 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000286778 ! expresses
relationship: RO:0015004 PCL:0052535 ! has characterizing marker set
property_value: IAO:0000028 "OPC_34 (Human)" xsd:string
property_value: PCL:0010058 "OLIG1 (Hsap)" xsd:string
property_value: PCL:0010058 "RP11-197H3.1 (Hsap)" xsd:string
property_value: PCL:0010058 "RP4-668E10.4 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 30.9%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 33.6%."}
property_value: PCL:0010063 HBA:4327 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Amygdala: 16.5%."}
property_value: skos:prefLabel "OPC_34" xsd:string
[Term]
id: PCL:0051036
def: "A oligodendrocyte precursor cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of OLIG1 (Hsap), MIR3681HG (Hsap), RP4-668E10.4 (Hsap). The soma of these cells can be found in the cerebral cortex, hippocampal formation. The reference data for this cell type is CS202210140_36." [DOI:10.1126/science.add7046]
synonym: "OLIG1 (Hsap), MIR3681HG (Hsap), RP4-668E10.4 (Hsap) expressing oligodendrocyte precursor cell of brain (Homo sapiens)" EXACT []
synonym: "OPC_35" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000184221 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000224184 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000278254 ! expresses
relationship: RO:0015004 PCL:0052536 ! has characterizing marker set
property_value: IAO:0000028 "OPC_35 (Human)" xsd:string
property_value: PCL:0010058 "MIR3681HG (Hsap)" xsd:string
property_value: PCL:0010058 "OLIG1 (Hsap)" xsd:string
property_value: PCL:0010058 "RP4-668E10.4 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 62.3%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 21.4%."}
property_value: skos:prefLabel "OPC_35" xsd:string
[Term]
id: PCL:0051037
def: "A oligodendrocyte precursor cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of LINC01608 (Hsap), RP4-668E10.4 (Hsap). The soma of these cells can be found in the cerebral cortex, thalamus, mesencephalon. The reference data for this cell type is CS202210140_37." [DOI:10.1126/science.add7046]
synonym: "LINC01608 (Hsap), RP4-668E10.4 (Hsap) expressing oligodendrocyte precursor cell of brain (Homo sapiens)" EXACT []
synonym: "OPC_36" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000253877 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000278254 ! expresses
relationship: RO:0015004 PCL:0052537 ! has characterizing marker set
property_value: IAO:0000028 "OPC_36 (Human)" xsd:string
property_value: PCL:0010058 "LINC01608 (Hsap)" xsd:string
property_value: PCL:0010058 "RP4-668E10.4 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 33.7%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 12.5%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 11.5%."}
property_value: skos:prefLabel "OPC_36" xsd:string
[Term]
id: PCL:0051038
def: "A differentiation-committed oligodendrocyte precursor of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of BCAS1 (Hsap), PRRX1 (Hsap), GPR17 (Hsap). The soma of these cells can be found in the cerebral cortex, hippocampal formation. The reference data for this cell type is CS202210140_38." [DOI:10.1126/science.add7046]
synonym: "BCAS1 (Hsap), PRRX1 (Hsap), GPR17 (Hsap) expressing differentiation-committed oligodendrocyte precursor of brain (Homo sapiens)" EXACT []
synonym: "COP_37" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000064787 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000116132 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000144230 ! expresses
relationship: RO:0015004 PCL:0052538 ! has characterizing marker set
property_value: IAO:0000028 "COP_37 (Human)" xsd:string
property_value: PCL:0010058 "BCAS1 (Hsap)" xsd:string
property_value: PCL:0010058 "GPR17 (Hsap)" xsd:string
property_value: PCL:0010058 "PRRX1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 35.6%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 19.5%."}
property_value: skos:prefLabel "COP_37" xsd:string
[Term]
id: PCL:0051039
def: "A differentiation-committed oligodendrocyte precursor of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of BCAS1 (Hsap), RP11-89N17.4 (Hsap). The soma of these cells can be found in the hippocampal formation, cerebral cortex. The reference data for this cell type is CS202210140_39." [DOI:10.1126/science.add7046]
synonym: "BCAS1 (Hsap), RP11-89N17.4 (Hsap) expressing differentiation-committed oligodendrocyte precursor of brain (Homo sapiens)" EXACT []
synonym: "COP_38" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000064787 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000236494 ! expresses
relationship: RO:0015004 PCL:0052539 ! has characterizing marker set
property_value: IAO:0000028 "COP_38 (Human)" xsd:string
property_value: PCL:0010058 "BCAS1 (Hsap)" xsd:string
property_value: PCL:0010058 "RP11-89N17.4 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 29.5%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 29.9%."}
property_value: skos:prefLabel "COP_38" xsd:string
[Term]
id: PCL:0051040
def: "A differentiation-committed oligodendrocyte precursor of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of TF (Hsap), CTD-2545M3.8 (Hsap). The soma of these cells can be found in the cerebral cortex, hippocampal formation, amygdala. The reference data for this cell type is CS202210140_40." [DOI:10.1126/science.add7046]
synonym: "COP_39" EXACT []
synonym: "TF (Hsap), CTD-2545M3.8 (Hsap) expressing differentiation-committed oligodendrocyte precursor of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000091513 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000268518 ! expresses
relationship: RO:0015004 PCL:0052540 ! has characterizing marker set
property_value: IAO:0000028 "COP_39 (Human)" xsd:string
property_value: PCL:0010058 "CTD-2545M3.8 (Hsap)" xsd:string
property_value: PCL:0010058 "TF (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 28.1%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 19.7%."}
property_value: PCL:0010063 HBA:4327 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Amygdala: 14.6%."}
property_value: skos:prefLabel "COP_39" xsd:string
[Term]
id: PCL:0051041
def: "A oligodendrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of PLP1 (Hsap), ERBB4 (Hsap), OPALIN (Hsap). The soma of these cells can be found in the hippocampal formation, cerebral cortex, amygdala. The reference data for this cell type is CS202210140_41." [DOI:10.1126/science.add7046]
synonym: "Oligo_40" EXACT []
synonym: "PLP1 (Hsap), ERBB4 (Hsap), OPALIN (Hsap) expressing oligodendrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000123560 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000178568 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000197430 ! expresses
relationship: RO:0015004 PCL:0052541 ! has characterizing marker set
property_value: IAO:0000028 "Oligo_40 (Human)" xsd:string
property_value: PCL:0010058 "ERBB4 (Hsap)" xsd:string
property_value: PCL:0010058 "OPALIN (Hsap)" xsd:string
property_value: PCL:0010058 "PLP1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 23.4%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 24.8%."}
property_value: PCL:0010063 HBA:4327 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Amygdala: 10.0%."}
property_value: skos:prefLabel "Oligo_40" xsd:string
[Term]
id: PCL:0051042
def: "A differentiation-committed oligodendrocyte precursor of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of OPALIN (Hsap), AC084149.2 (Hsap). The soma of these cells can be found in the amygdala, hypothalamus, basal forebrain. The reference data for this cell type is CS202210140_42." [DOI:10.1126/science.add7046]
synonym: "COP_41" EXACT []
synonym: "OPALIN (Hsap), AC084149.2 (Hsap) expressing differentiation-committed oligodendrocyte precursor of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000197430 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000227088 ! expresses
relationship: RO:0015004 PCL:0052542 ! has characterizing marker set
property_value: IAO:0000028 "COP_41 (Human)" xsd:string
property_value: PCL:0010058 "AC084149.2 (Hsap)" xsd:string
property_value: PCL:0010058 "OPALIN (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 20.2%."}
property_value: PCL:0010063 HBA:4327 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Amygdala: 24.7%."}
property_value: PCL:0010063 HBA:4540 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hypothalamus: 23.3%."}
property_value: skos:prefLabel "COP_41" xsd:string
[Term]
id: PCL:0051043
def: "A differentiation-committed oligodendrocyte precursor of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of CNDP1 (Hsap), NTNG1 (Hsap), LINC01608 (Hsap). The soma of these cells can be found in the thalamus. The reference data for this cell type is CS202210140_43." [DOI:10.1126/science.add7046]
synonym: "CNDP1 (Hsap), NTNG1 (Hsap), LINC01608 (Hsap) expressing differentiation-committed oligodendrocyte precursor of brain (Homo sapiens)" EXACT []
synonym: "COP_42" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000150656 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000162631 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000253877 ! expresses
relationship: RO:0015004 PCL:0052543 ! has characterizing marker set
property_value: IAO:0000028 "COP_42 (Human)" xsd:string
property_value: PCL:0010058 "CNDP1 (Hsap)" xsd:string
property_value: PCL:0010058 "LINC01608 (Hsap)" xsd:string
property_value: PCL:0010058 "NTNG1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 92.7%."}
property_value: skos:prefLabel "COP_42" xsd:string
[Term]
id: PCL:0051044
def: "A differentiation-committed oligodendrocyte precursor of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SLC5A11 (Hsap), MOBP (Hsap). The soma of these cells can be found in the thalamus, hypothalamus, amygdala. The reference data for this cell type is CS202210140_44." [DOI:10.1126/science.add7046]
synonym: "COP_43" EXACT []
synonym: "SLC5A11 (Hsap), MOBP (Hsap) expressing differentiation-committed oligodendrocyte precursor of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000158865 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000168314 ! expresses
relationship: RO:0015004 PCL:0052544 ! has characterizing marker set
property_value: IAO:0000028 "COP_43 (Human)" xsd:string
property_value: PCL:0010058 "MOBP (Hsap)" xsd:string
property_value: PCL:0010058 "SLC5A11 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4327 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Amygdala: 10.3%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 36.2%."}
property_value: PCL:0010063 HBA:4540 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hypothalamus: 18.0%."}
property_value: skos:prefLabel "COP_43" xsd:string
[Term]
id: PCL:0051045
def: "A oligodendrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of TF (Hsap), SLC5A11 (Hsap), CARNS1 (Hsap), MOBP (Hsap), ANLN (Hsap). The soma of these cells can be found in the thalamus, pons, mesencephalon. The reference data for this cell type is CS202210140_45." [DOI:10.1126/science.add7046]
synonym: "Oligo_44" EXACT []
synonym: "TF (Hsap), SLC5A11 (Hsap), CARNS1 (Hsap), MOBP (Hsap), ANLN (Hsap) expressing oligodendrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000011426 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000091513 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000158865 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000168314 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000172508 ! expresses
relationship: RO:0015004 PCL:0052545 ! has characterizing marker set
property_value: IAO:0000028 "Oligo_44 (Human)" xsd:string
property_value: PCL:0010058 "ANLN (Hsap)" xsd:string
property_value: PCL:0010058 "CARNS1 (Hsap)" xsd:string
property_value: PCL:0010058 "MOBP (Hsap)" xsd:string
property_value: PCL:0010058 "SLC5A11 (Hsap)" xsd:string
property_value: PCL:0010058 "TF (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 20.9%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 19.1%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 19.2%."}
property_value: skos:prefLabel "Oligo_44" xsd:string
[Term]
id: PCL:0051046
def: "A oligodendrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SLC5A11 (Hsap), CERCAM (Hsap), MOBP (Hsap), OPALIN (Hsap). The soma of these cells can be found in the cerebral cortex, basal forebrain, mesencephalon. The reference data for this cell type is CS202210140_46." [DOI:10.1126/science.add7046]
synonym: "Oligo_45" EXACT []
synonym: "SLC5A11 (Hsap), CERCAM (Hsap), MOBP (Hsap), OPALIN (Hsap) expressing oligodendrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000158865 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000167123 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000168314 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000197430 ! expresses
relationship: RO:0015004 PCL:0052546 ! has characterizing marker set
property_value: IAO:0000028 "Oligo_45 (Human)" xsd:string
property_value: PCL:0010058 "CERCAM (Hsap)" xsd:string
property_value: PCL:0010058 "MOBP (Hsap)" xsd:string
property_value: PCL:0010058 "OPALIN (Hsap)" xsd:string
property_value: PCL:0010058 "SLC5A11 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 20.0%."}
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 18.5%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 15.8%."}
property_value: skos:prefLabel "Oligo_45" xsd:string
[Term]
id: PCL:0051047
def: "A oligodendrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of RNASE1 (Hsap), CNDP1 (Hsap), LINC01608 (Hsap). The soma of these cells can be found in the thalamus, mesencephalon, cerebral cortex. The reference data for this cell type is CS202210140_47." [DOI:10.1126/science.add7046]
synonym: "Oligo_46" EXACT []
synonym: "RNASE1 (Hsap), CNDP1 (Hsap), LINC01608 (Hsap) expressing oligodendrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000129538 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000150656 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000253877 ! expresses
relationship: RO:0015004 PCL:0052547 ! has characterizing marker set
property_value: IAO:0000028 "Oligo_46 (Human)" xsd:string
property_value: PCL:0010058 "CNDP1 (Hsap)" xsd:string
property_value: PCL:0010058 "LINC01608 (Hsap)" xsd:string
property_value: PCL:0010058 "RNASE1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 13.7%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 22.7%."}
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 19.9%."}
property_value: skos:prefLabel "Oligo_46" xsd:string
[Term]
id: PCL:0051048
def: "A oligodendrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of PLP1 (Hsap), OPALIN (Hsap), LINC01608 (Hsap). The soma of these cells can be found in the thalamus, cerebral cortex, hippocampal formation. The reference data for this cell type is CS202210140_48." [DOI:10.1126/science.add7046]
synonym: "Oligo_47" EXACT []
synonym: "PLP1 (Hsap), OPALIN (Hsap), LINC01608 (Hsap) expressing oligodendrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000123560 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000197430 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000253877 ! expresses
relationship: RO:0015004 PCL:0052548 ! has characterizing marker set
property_value: IAO:0000028 "Oligo_47 (Human)" xsd:string
property_value: PCL:0010058 "LINC01608 (Hsap)" xsd:string
property_value: PCL:0010058 "OPALIN (Hsap)" xsd:string
property_value: PCL:0010058 "PLP1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 20.9%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 13.8%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 24.9%."}
property_value: skos:prefLabel "Oligo_47" xsd:string
[Term]
id: PCL:0051049
def: "A oligodendrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of OPALIN (Hsap), RP11-38B6.1 (Hsap). The soma of these cells can be found in the basal forebrain, thalamus. The reference data for this cell type is CS202210140_49." [DOI:10.1126/science.add7046]
synonym: "Oligo_48" EXACT []
synonym: "OPALIN (Hsap), RP11-38B6.1 (Hsap) expressing oligodendrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000197430 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000287069 ! expresses
relationship: RO:0015004 PCL:0052549 ! has characterizing marker set
property_value: IAO:0000028 "Oligo_48 (Human)" xsd:string
property_value: PCL:0010058 "OPALIN (Hsap)" xsd:string
property_value: PCL:0010058 "RP11-38B6.1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 47.8%."}
property_value: PCL:0010063 HBA:4392 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Thalamus: 42.2%."}
property_value: skos:prefLabel "Oligo_48" xsd:string
[Term]
id: PCL:0051050
def: "A oligodendrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of TF (Hsap), SLC5A11 (Hsap), CRYAB (Hsap), CARNS1 (Hsap), AC084149.2 (Hsap). The soma of these cells can be found in the pons, mesencephalon, myelencephalon. The reference data for this cell type is CS202210140_50." [DOI:10.1126/science.add7046]
synonym: "Oligo_49" EXACT []
synonym: "TF (Hsap), SLC5A11 (Hsap), CRYAB (Hsap), CARNS1 (Hsap), AC084149.2 (Hsap) expressing oligodendrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000091513 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000109846 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000158865 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000172508 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000227088 ! expresses
relationship: RO:0015004 PCL:0052550 ! has characterizing marker set
property_value: IAO:0000028 "Oligo_49 (Human)" xsd:string
property_value: PCL:0010058 "AC084149.2 (Hsap)" xsd:string
property_value: PCL:0010058 "CARNS1 (Hsap)" xsd:string
property_value: PCL:0010058 "CRYAB (Hsap)" xsd:string
property_value: PCL:0010058 "SLC5A11 (Hsap)" xsd:string
property_value: PCL:0010058 "TF (Hsap)" xsd:string
property_value: PCL:0010063 HBA:9001 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Midbrain: 20.2%."}
property_value: PCL:0010063 HBA:9131 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Pons: 30.3%."}
property_value: PCL:0010063 HBA:9512 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Medulla: 12.2%."}
property_value: skos:prefLabel "Oligo_49" xsd:string
[Term]
id: PCL:0051051
def: "A oligodendrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of SLC5A11 (Hsap), PTCSC3 (Hsap). The soma of these cells can be found in the hypothalamus. The reference data for this cell type is CS202210140_51." [DOI:10.1126/science.add7046]
synonym: "Oligo_50" EXACT []
synonym: "SLC5A11 (Hsap), PTCSC3 (Hsap) expressing oligodendrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000158865 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000259104 ! expresses
relationship: RO:0015004 PCL:0052551 ! has characterizing marker set
property_value: IAO:0000028 "Oligo_50 (Human)" xsd:string
property_value: PCL:0010058 "PTCSC3 (Hsap)" xsd:string
property_value: PCL:0010058 "SLC5A11 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4540 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hypothalamus: 90.7%."}
property_value: skos:prefLabel "Oligo_50" xsd:string
[Term]
id: PCL:0051052
def: "A Bergmann glial cell of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of LAMA2 (Hsap), LINC01727 (Hsap). The soma of these cells can be found in the cerebellum. The reference data for this cell type is CS202210140_52." [DOI:10.1126/science.add7046]
synonym: "Bgl_51" EXACT []
synonym: "LAMA2 (Hsap), LINC01727 (Hsap) expressing Bergmann glial cell of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000196569 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000279082 ! expresses
relationship: RO:0015004 PCL:0052552 ! has characterizing marker set
property_value: IAO:0000028 "Bgl_51 (Human)" xsd:string
property_value: PCL:0010058 "LAMA2 (Hsap)" xsd:string
property_value: PCL:0010058 "LINC01727 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4696 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebellum: 95.8%."}
property_value: skos:prefLabel "Bgl_51" xsd:string
[Term]
id: PCL:0051053
def: "A astrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of COL5A3 (Hsap), LINC01727 (Hsap). The soma of these cells can be found in the cerebral cortex. The reference data for this cell type is CS202210140_53." [DOI:10.1126/science.add7046]
synonym: "Astro_52" EXACT []
synonym: "COL5A3 (Hsap), LINC01727 (Hsap) expressing astrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000080573 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000279082 ! expresses
relationship: RO:0015004 PCL:0052553 ! has characterizing marker set
property_value: IAO:0000028 "Astro_52 (Human)" xsd:string
property_value: PCL:0010058 "COL5A3 (Hsap)" xsd:string
property_value: PCL:0010058 "LINC01727 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 90.3%."}
property_value: skos:prefLabel "Astro_52" xsd:string
[Term]
id: PCL:0051054
def: "A astrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of COL5A3 (Hsap), GLI3 (Hsap). The soma of these cells can be found in the hippocampal formation. The reference data for this cell type is CS202210140_54." [DOI:10.1126/science.add7046]
synonym: "Astro_53" EXACT []
synonym: "COL5A3 (Hsap), GLI3 (Hsap) expressing astrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000080573 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000106571 ! expresses
relationship: RO:0015004 PCL:0052554 ! has characterizing marker set
property_value: IAO:0000028 "Astro_53 (Human)" xsd:string
property_value: PCL:0010058 "COL5A3 (Hsap)" xsd:string
property_value: PCL:0010058 "GLI3 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 96.3%."}
property_value: skos:prefLabel "Astro_53" xsd:string
[Term]
id: PCL:0051055
def: "A astrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of GLI3 (Hsap), ETNPPL (Hsap), OBI1-AS1 (Hsap), F11-AS1 (Hsap). The soma of these cells can be found in the cerebral cortex, hippocampal formation, amygdala. The reference data for this cell type is CS202210140_55." [DOI:10.1126/science.add7046]
synonym: "Astro_54" EXACT []
synonym: "GLI3 (Hsap), ETNPPL (Hsap), OBI1-AS1 (Hsap), F11-AS1 (Hsap) expressing astrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000106571 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000164089 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000234377 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000251165 ! expresses
relationship: RO:0015004 PCL:0052555 ! has characterizing marker set
property_value: IAO:0000028 "Astro_54 (Human)" xsd:string
property_value: PCL:0010058 "ETNPPL (Hsap)" xsd:string
property_value: PCL:0010058 "F11-AS1 (Hsap)" xsd:string
property_value: PCL:0010058 "GLI3 (Hsap)" xsd:string
property_value: PCL:0010058 "OBI1-AS1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4008 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Cerebral cortex: 38.8%."}
property_value: PCL:0010063 HBA:4249 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Hippocampus: 33.1%."}
property_value: PCL:0010063 HBA:4327 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Amygdala: 22.1%."}
property_value: skos:prefLabel "Astro_54" xsd:string
[Term]
id: PCL:0051056
def: "A astrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of FGFR3 (Hsap), WIF1 (Hsap), HPSE2 (Hsap). The soma of these cells can be found in the basal forebrain. The reference data for this cell type is CS202210140_56." [DOI:10.1126/science.add7046]
synonym: "Astro_55" EXACT []
synonym: "FGFR3 (Hsap), WIF1 (Hsap), HPSE2 (Hsap) expressing astrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000068078 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000156076 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000172987 ! expresses
relationship: RO:0015004 PCL:0052556 ! has characterizing marker set
property_value: IAO:0000028 "Astro_55 (Human)" xsd:string
property_value: PCL:0010058 "FGFR3 (Hsap)" xsd:string
property_value: PCL:0010058 "HPSE2 (Hsap)" xsd:string
property_value: PCL:0010058 "WIF1 (Hsap)" xsd:string
property_value: PCL:0010063 HBA:4300 {comment="Location assignment based on origin of cells in brain dissections with a cut-off of 10% to account for dissection errors Basal forebrain: 82.4%."}
property_value: skos:prefLabel "Astro_55" xsd:string
[Term]
id: PCL:0051057
def: "A astrocyte of the Homo sapiens brain. These cells can be distinguished from other cells in the brain by their selective expression of TNC (Hsap), GPC5 (Hsap), OBI1-AS1 (Hsap). The soma of these cells can be found in the hypothalamus, thalamus, amygdala. The reference data for this cell type is CS202210140_57." [DOI:10.1126/science.add7046]
synonym: "Astro_56" EXACT []
synonym: "TNC (Hsap), GPC5 (Hsap), OBI1-AS1 (Hsap) expressing astrocyte of brain (Homo sapiens)" EXACT []
relationship: BFO:0000050 HBA:4005
relationship: RO:0002162 NCBITaxon:9606
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000041982 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000179399 ! expresses
relationship: RO:0002292 http://identifiers.org/ensembl/ENSG00000234377 ! expresses