From 79cb6435141baa450c3642a72b092285a04dcc78 Mon Sep 17 00:00:00 2001 From: Gabriele Bozzola Date: Tue, 21 Nov 2023 09:51:45 -0800 Subject: [PATCH] Update dependencies --- .dev/Manifest.toml | 10 ++--- benchmarks/bickleyjet/Manifest.toml | 12 ++--- docs/Manifest.toml | 68 ++++++++++++++--------------- examples/Manifest.toml | 48 ++++++++++---------- perf/Manifest.toml | 56 ++++++++++++------------ 5 files changed, 97 insertions(+), 97 deletions(-) diff --git a/.dev/Manifest.toml b/.dev/Manifest.toml index c4aceb72fe..5fd629932e 100644 --- a/.dev/Manifest.toml +++ b/.dev/Manifest.toml @@ -1,6 +1,6 @@ # This file is machine-generated - editing it directly is not advised -julia_version = "1.9.4" +julia_version = "1.9.3" manifest_format = "2.0" project_hash = "30b405be1c677184b7703a9bfb3d2100029ccad0" @@ -86,12 +86,12 @@ version = "1.0.42" [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" -version = "0.6.4" +version = "0.6.3" [[deps.LibCURL_jll]] deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"] uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0" -version = "8.4.0+0" +version = "7.84.0+0" [[deps.LibGit2]] deps = ["Base64", "NetworkOptions", "Printf", "SHA"] @@ -100,7 +100,7 @@ uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" [[deps.LibSSH2_jll]] deps = ["Artifacts", "Libdl", "MbedTLS_jll"] uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8" -version = "1.11.0+1" +version = "1.10.2+0" [[deps.Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" @@ -213,7 +213,7 @@ version = "1.2.13+0" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" -version = "1.52.0+1" +version = "1.48.0+0" [[deps.p7zip_jll]] deps = ["Artifacts", "Libdl"] diff --git a/benchmarks/bickleyjet/Manifest.toml b/benchmarks/bickleyjet/Manifest.toml index 0d5ea3425e..cb165d6e1f 100644 --- a/benchmarks/bickleyjet/Manifest.toml +++ b/benchmarks/bickleyjet/Manifest.toml @@ -81,9 +81,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "e63330a7d2dcc6245514d9035f4fab798ea6ca74" +git-tree-sha1 = "67bcff3f50026b6fa952721525d3a04f0570d432" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.2.0" +version = "1.2.1" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -160,7 +160,7 @@ version = "0.5.6" deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack", "WeakValueDicts"] path = "../.." uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.56" +version = "0.11.0" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -1100,10 +1100,10 @@ uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" version = "0.8.8" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "StaticArraysCore"] -git-tree-sha1 = "0adf069a2a490c47273727e029371b31d44b72b2" +deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] +git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.6.5" +version = "1.7.0" weakdeps = ["Statistics"] [deps.StaticArrays.extensions] diff --git a/docs/Manifest.toml b/docs/Manifest.toml index 8513c1c8a6..cbbccea16a 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -26,9 +26,9 @@ weakdeps = ["ChainRulesCore", "Test"] AbstractFFTsTestExt = "Test" [[deps.AbstractLattices]] -git-tree-sha1 = "f35684b7349da49fcc8a9e520e30e45dbb077166" +git-tree-sha1 = "222ee9e50b98f51b5d78feb93dd928880df35f06" uuid = "398f06c4-4d28-53ec-89ca-5b2656b7603d" -version = "0.2.1" +version = "0.3.0" [[deps.AbstractTrees]] git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c" @@ -147,9 +147,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "e63330a7d2dcc6245514d9035f4fab798ea6ca74" +git-tree-sha1 = "67bcff3f50026b6fa952721525d3a04f0570d432" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.2.0" +version = "1.2.1" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -232,9 +232,9 @@ version = "1.0.1+0" [[deps.CUDA]] deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "Statistics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "64461b0e9df3069248979113ce8ab6d11bd371cf" +git-tree-sha1 = "76582ae19006b1186e87dadd781747f76cead72c" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "5.1.0" +version = "5.1.1" weakdeps = ["ChainRulesCore", "SpecialFunctions"] [deps.CUDA.extensions] @@ -291,37 +291,37 @@ version = "0.5.6" deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack", "WeakValueDicts"] path = ".." uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.56" +version = "0.11.0" [[deps.ClimaCoreMakie]] deps = ["ClimaCore", "Makie"] path = "../lib/ClimaCoreMakie" uuid = "908f55d8-4145-4867-9c14-5dad1a479e4d" -version = "0.4.0" +version = "0.4.1" [[deps.ClimaCorePlots]] deps = ["ClimaCore", "RecipesBase", "StaticArrays", "TriplotBase"] path = "../lib/ClimaCorePlots" uuid = "cf7c7e5a-b407-4c48-9047-11a94a308626" -version = "0.2.5" +version = "0.2.6" [[deps.ClimaCoreSpectra]] deps = ["ClimaCore", "FFTW"] path = "../lib/ClimaCoreSpectra" uuid = "c2caaa1d-32ae-4754-ba0d-80e7561362e9" -version = "0.1.0" +version = "0.1.1" [[deps.ClimaCoreTempestRemap]] deps = ["ClimaComms", "ClimaCore", "Dates", "LinearAlgebra", "NCDatasets", "PkgVersion", "TempestRemap_jll"] path = "../lib/ClimaCoreTempestRemap" uuid = "d934ef94-cdd4-4710-83d6-720549644b70" -version = "0.3.10" +version = "0.3.11" [[deps.ClimaCoreVTK]] deps = ["ClimaCore", "WriteVTK"] path = "../lib/ClimaCoreVTK" uuid = "c8b6d40d-e815-466f-95ae-c48aefa668fa" -version = "0.7.2" +version = "0.7.3" [[deps.CloseOpenIntervals]] deps = ["Static", "StaticArrayInterface"] @@ -495,9 +495,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "5e365e0744ae1fdd44e62416343e7bfe848999d8" +git-tree-sha1 = "35dadcc236b38661368d5a9d5e2dfabeee112c54" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.139.0" +version = "6.140.1" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -1356,9 +1356,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearAlgebraX]] deps = ["LinearAlgebra", "Mods", "Permutations", "Primes", "SimplePolynomials"] -git-tree-sha1 = "558a338f1eeabe933f9c2d4052aa7c2c707c3d52" +git-tree-sha1 = "4ef47ebed04355b50836d4844eabb9d357c1cc8f" uuid = "9b3f67b0-2d00-526e-9884-9e4938f8fb88" -version = "0.1.12" +version = "0.1.13" [[deps.LinearSolve]] deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "EnzymeCore", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "UnPack"] @@ -1633,10 +1633,10 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "f400009287afedef175058e64aadf7d41f593fef" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "25baacdcae7d8a981fd1d3d8f79c2cd2f8658332" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "2.8.0" +version = "2.8.1" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" @@ -1736,9 +1736,9 @@ version = "1.6.2" [[deps.OrdinaryDiffEq]] deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "ea532499662b771442746811fa345a7ea516225c" +git-tree-sha1 = "42d0b4515472a25a3b47be228c03ec842bdc9d49" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.59.1" +version = "6.59.2" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -2120,9 +2120,9 @@ version = "0.6.42" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "baa0f858af55ea937183c988bd4b3e79e0bf699a" +git-tree-sha1 = "b8518e0f02940d0d8275632921cc408c99fb5157" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.8.1" +version = "2.8.2" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -2208,9 +2208,9 @@ version = "1.1.0" [[deps.SimpleGraphs]] deps = ["AbstractLattices", "Combinatorics", "DataStructures", "IterTools", "LightXML", "LinearAlgebra", "LinearAlgebraX", "Optim", "Primes", "Random", "RingLists", "SimplePartitions", "SimplePolynomials", "SimpleRandom", "SparseArrays", "Statistics"] -git-tree-sha1 = "b608903049d11cc557c45e03b3a53e9260579c19" +git-tree-sha1 = "c5538efb4e308548fd2623e2778c0b6559b1aaa6" uuid = "55797a34-41de-5266-9ec1-32ac4eb504d3" -version = "0.8.4" +version = "0.8.5" [[deps.SimpleNonlinearSolve]] deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"] @@ -2226,9 +2226,9 @@ version = "0.1.25" [[deps.SimplePartitions]] deps = ["AbstractLattices", "DataStructures", "Permutations"] -git-tree-sha1 = "dcc02923a53f316ab97da8ef3136e80b4543dbf1" +git-tree-sha1 = "e9330391d04241eafdc358713b48396619c83bcb" uuid = "ec83eff0-a5b5-5643-ae32-5cbf6eedec9d" -version = "0.3.0" +version = "0.3.1" [[deps.SimplePolynomials]] deps = ["Mods", "Multisets", "Polynomials", "Primes"] @@ -2280,9 +2280,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "49068dceed7febe32afe2d7b874172a7c3198cb3" +git-tree-sha1 = "07272c80c278947baca092df0a01da4a10622ad5" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.12.0" +version = "2.13.0" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" @@ -2340,10 +2340,10 @@ weakdeps = ["OffsetArrays", "StaticArrays"] StaticArrayInterfaceStaticArraysExt = "StaticArrays" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "StaticArraysCore"] -git-tree-sha1 = "0adf069a2a490c47273727e029371b31d44b72b2" +deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] +git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.6.5" +version = "1.7.0" weakdeps = ["Statistics"] [deps.StaticArrays.extensions] @@ -2624,9 +2624,9 @@ version = "0.1.0" [[deps.WoodburyMatrices]] deps = ["LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "de67fa59e33ad156a590055375a30b23c40299d3" +git-tree-sha1 = "5f24e158cf4cee437052371455fe361f526da062" uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6" -version = "0.5.5" +version = "0.5.6" [[deps.WriteVTK]] deps = ["Base64", "CodecZlib", "FillArrays", "LightXML", "TranscodingStreams", "VTKBase"] diff --git a/examples/Manifest.toml b/examples/Manifest.toml index 1370fc27d4..54ee418adc 100644 --- a/examples/Manifest.toml +++ b/examples/Manifest.toml @@ -127,9 +127,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "e63330a7d2dcc6245514d9035f4fab798ea6ca74" +git-tree-sha1 = "67bcff3f50026b6fa952721525d3a04f0570d432" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.2.0" +version = "1.2.1" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -205,9 +205,9 @@ version = "0.2.4" [[deps.CUDA]] deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "Statistics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "64461b0e9df3069248979113ce8ab6d11bd371cf" +git-tree-sha1 = "76582ae19006b1186e87dadd781747f76cead72c" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "5.1.0" +version = "5.1.1" [deps.CUDA.extensions] ChainRulesCoreExt = "ChainRulesCore" @@ -251,25 +251,25 @@ version = "0.5.6" deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack", "WeakValueDicts"] path = ".." uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.56" +version = "0.11.0" [[deps.ClimaCorePlots]] deps = ["ClimaCore", "RecipesBase", "StaticArrays", "TriplotBase"] path = "../lib/ClimaCorePlots" uuid = "cf7c7e5a-b407-4c48-9047-11a94a308626" -version = "0.2.5" +version = "0.2.6" [[deps.ClimaCoreTempestRemap]] deps = ["ClimaComms", "ClimaCore", "Dates", "LinearAlgebra", "NCDatasets", "PkgVersion", "TempestRemap_jll"] path = "../lib/ClimaCoreTempestRemap" uuid = "d934ef94-cdd4-4710-83d6-720549644b70" -version = "0.3.10" +version = "0.3.11" [[deps.ClimaCoreVTK]] deps = ["ClimaCore", "WriteVTK"] path = "../lib/ClimaCoreVTK" uuid = "c8b6d40d-e815-466f-95ae-c48aefa668fa" -version = "0.7.2" +version = "0.7.3" [[deps.ClimaTimeSteppers]] deps = ["CUDA", "ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -441,9 +441,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "5e365e0744ae1fdd44e62416343e7bfe848999d8" +git-tree-sha1 = "35dadcc236b38661368d5a9d5e2dfabeee112c54" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.139.0" +version = "6.140.1" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -471,9 +471,9 @@ version = "6.139.0" [[deps.DiffEqCallbacks]] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "6cb07ea2557f425a5464ab1bd21c50464368c1a2" +git-tree-sha1 = "4e4de57a0ac47b2f20aae62f132355b058e9f0cd" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" -version = "2.33.1" +version = "2.34.0" [deps.DiffEqCallbacks.weakdeps] OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" @@ -1366,10 +1366,10 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "f400009287afedef175058e64aadf7d41f593fef" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "25baacdcae7d8a981fd1d3d8f79c2cd2f8658332" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "2.8.0" +version = "2.8.1" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" @@ -1446,9 +1446,9 @@ version = "1.6.2" [[deps.OrdinaryDiffEq]] deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "ea532499662b771442746811fa345a7ea516225c" +git-tree-sha1 = "42d0b4515472a25a3b47be228c03ec842bdc9d49" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.59.1" +version = "6.59.2" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1729,9 +1729,9 @@ version = "0.6.42" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "baa0f858af55ea937183c988bd4b3e79e0bf699a" +git-tree-sha1 = "b8518e0f02940d0d8275632921cc408c99fb5157" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.8.1" +version = "2.8.2" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -1842,9 +1842,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "49068dceed7febe32afe2d7b874172a7c3198cb3" +git-tree-sha1 = "07272c80c278947baca092df0a01da4a10622ad5" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.12.0" +version = "2.13.0" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" @@ -1898,10 +1898,10 @@ weakdeps = ["OffsetArrays", "StaticArrays"] StaticArrayInterfaceStaticArraysExt = "StaticArrays" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "StaticArraysCore"] -git-tree-sha1 = "0adf069a2a490c47273727e029371b31d44b72b2" +deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] +git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.6.5" +version = "1.7.0" weakdeps = ["Statistics"] [deps.StaticArrays.extensions] diff --git a/perf/Manifest.toml b/perf/Manifest.toml index 70c662c2d8..956a31c61f 100644 --- a/perf/Manifest.toml +++ b/perf/Manifest.toml @@ -122,9 +122,9 @@ version = "0.4.2" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools"] -git-tree-sha1 = "e63330a7d2dcc6245514d9035f4fab798ea6ca74" +git-tree-sha1 = "67bcff3f50026b6fa952721525d3a04f0570d432" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "1.2.0" +version = "1.2.1" weakdeps = ["SparseArrays"] [deps.BandedMatrices.extensions] @@ -186,9 +186,9 @@ version = "0.2.4" [[deps.CUDA]] deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "Crayons", "DataFrames", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LLVMLoopInfo", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "NVTX", "Preferences", "PrettyTables", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "Statistics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "64461b0e9df3069248979113ce8ab6d11bd371cf" +git-tree-sha1 = "76582ae19006b1186e87dadd781747f76cead72c" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "5.1.0" +version = "5.1.1" [deps.CUDA.extensions] ChainRulesCoreExt = "ChainRulesCore" @@ -232,25 +232,25 @@ version = "0.5.6" deps = ["Adapt", "BandedMatrices", "BlockArrays", "CUDA", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "LinearAlgebra", "Memoize", "PkgVersion", "RecursiveArrayTools", "Requires", "RootSolvers", "SparseArrays", "Static", "StaticArrays", "Statistics", "UnPack", "WeakValueDicts"] path = ".." uuid = "d414da3d-4745-48bb-8d80-42e94e092884" -version = "0.10.56" +version = "0.11.0" [[deps.ClimaCorePlots]] deps = ["ClimaCore", "RecipesBase", "StaticArrays", "TriplotBase"] path = "../lib/ClimaCorePlots" uuid = "cf7c7e5a-b407-4c48-9047-11a94a308626" -version = "0.2.5" +version = "0.2.6" [[deps.ClimaCoreTempestRemap]] deps = ["ClimaComms", "ClimaCore", "Dates", "LinearAlgebra", "NCDatasets", "PkgVersion", "TempestRemap_jll"] path = "../lib/ClimaCoreTempestRemap" uuid = "d934ef94-cdd4-4710-83d6-720549644b70" -version = "0.3.10" +version = "0.3.11" [[deps.ClimaCoreVTK]] deps = ["ClimaCore", "WriteVTK"] path = "../lib/ClimaCoreVTK" uuid = "c8b6d40d-e815-466f-95ae-c48aefa668fa" -version = "0.7.2" +version = "0.7.3" [[deps.ClimaTimeSteppers]] deps = ["CUDA", "ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"] @@ -440,9 +440,9 @@ version = "1.9.1" [[deps.DiffEqBase]] deps = ["ArrayInterface", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"] -git-tree-sha1 = "5e365e0744ae1fdd44e62416343e7bfe848999d8" +git-tree-sha1 = "35dadcc236b38661368d5a9d5e2dfabeee112c54" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.139.0" +version = "6.140.1" [deps.DiffEqBase.extensions] DiffEqBaseChainRulesCoreExt = "ChainRulesCore" @@ -470,9 +470,9 @@ version = "6.139.0" [[deps.DiffEqCallbacks]] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "6cb07ea2557f425a5464ab1bd21c50464368c1a2" +git-tree-sha1 = "4e4de57a0ac47b2f20aae62f132355b058e9f0cd" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" -version = "2.33.1" +version = "2.34.0" [deps.DiffEqCallbacks.weakdeps] OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" @@ -911,9 +911,9 @@ version = "1.0.0" [[deps.JET]] deps = ["InteractiveUtils", "JuliaInterpreter", "LoweredCodeUtils", "MacroTools", "Pkg", "PrecompileTools", "Preferences", "Revise", "Test"] -git-tree-sha1 = "ea124c5bfafb9b3d225af35ed1a131686bdef6fd" +git-tree-sha1 = "e67f79f53406ef949dfcaaf775043ed14aac1cc2" uuid = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b" -version = "0.8.19" +version = "0.8.20" [[deps.JLD2]] deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "PrecompileTools", "Printf", "Reexport", "Requires", "TranscodingStreams", "UUIDs"] @@ -1400,10 +1400,10 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "f400009287afedef175058e64aadf7d41f593fef" +deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FastBroadcast", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "25baacdcae7d8a981fd1d3d8f79c2cd2f8658332" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "2.8.0" +version = "2.8.1" [deps.NonlinearSolve.extensions] NonlinearSolveBandedMatricesExt = "BandedMatrices" @@ -1480,9 +1480,9 @@ version = "1.6.2" [[deps.OrdinaryDiffEq]] deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "ea532499662b771442746811fa345a7ea516225c" +git-tree-sha1 = "42d0b4515472a25a3b47be228c03ec842bdc9d49" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.59.1" +version = "6.59.2" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1491,9 +1491,9 @@ version = "10.42.0+0" [[deps.PProf]] deps = ["AbstractTrees", "CodecZlib", "EnumX", "FlameGraphs", "Libdl", "OrderedCollections", "Profile", "ProgressMeter", "ProtoBuf", "pprof_jll"] -git-tree-sha1 = "e9f00b3f639d55aa66de79ae01dcc624312c9a14" +git-tree-sha1 = "c909f647881a80ec4c5974eec9624b0c96afad9d" uuid = "e4faabce-9ead-11e9-39d9-4379958e3056" -version = "3.0.0" +version = "3.1.0" [[deps.PackageExtensionCompat]] git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" @@ -1803,9 +1803,9 @@ version = "0.6.42" [[deps.SciMLBase]] deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "QuasiMonteCarlo", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "baa0f858af55ea937183c988bd4b3e79e0bf699a" +git-tree-sha1 = "b8518e0f02940d0d8275632921cc408c99fb5157" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "2.8.1" +version = "2.8.2" [deps.SciMLBase.extensions] SciMLBaseChainRulesCoreExt = "ChainRulesCore" @@ -1928,9 +1928,9 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "PackageExtensionCompat", "Random", "Reexport", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "UnPack", "VertexSafeGraphs"] -git-tree-sha1 = "49068dceed7febe32afe2d7b874172a7c3198cb3" +git-tree-sha1 = "07272c80c278947baca092df0a01da4a10622ad5" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "2.12.0" +version = "2.13.0" [deps.SparseDiffTools.extensions] SparseDiffToolsEnzymeExt = "Enzyme" @@ -1978,10 +1978,10 @@ weakdeps = ["OffsetArrays", "StaticArrays"] StaticArrayInterfaceStaticArraysExt = "StaticArrays" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "StaticArraysCore"] -git-tree-sha1 = "0adf069a2a490c47273727e029371b31d44b72b2" +deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"] +git-tree-sha1 = "5ef59aea6f18c25168842bded46b16662141ab87" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.6.5" +version = "1.7.0" weakdeps = ["Statistics"] [deps.StaticArrays.extensions]