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b/dev/_modules/pyhgf/updates/prediction_error/dirichlet.html index a1dbe3c83..6e876e9b2 100644 --- a/dev/_modules/pyhgf/updates/prediction_error/dirichlet.html +++ b/dev/_modules/pyhgf/updates/prediction_error/dirichlet.html @@ -7,7 +7,7 @@ - pyhgf.updates.prediction_error.dirichlet — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.dirichlet — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/updates/prediction_error/exponential.html b/dev/_modules/pyhgf/updates/prediction_error/exponential.html index c2d6c29de..306adbaad 100644 --- a/dev/_modules/pyhgf/updates/prediction_error/exponential.html +++ b/dev/_modules/pyhgf/updates/prediction_error/exponential.html @@ -7,7 +7,7 @@ - pyhgf.updates.prediction_error.exponential — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.exponential — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/add_edges.html b/dev/_modules/pyhgf/utils/add_edges.html index 84448b4e3..9ca7adb5e 100644 --- a/dev/_modules/pyhgf/utils/add_edges.html +++ b/dev/_modules/pyhgf/utils/add_edges.html @@ -7,7 +7,7 @@ - pyhgf.utils.add_edges — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.add_edges — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/add_parent.html b/dev/_modules/pyhgf/utils/add_parent.html index cb4558b98..19b504c9e 100644 --- a/dev/_modules/pyhgf/utils/add_parent.html +++ b/dev/_modules/pyhgf/utils/add_parent.html @@ -7,7 +7,7 @@ - pyhgf.utils.add_parent — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.add_parent — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/beliefs_propagation.html b/dev/_modules/pyhgf/utils/beliefs_propagation.html index 3c3936689..b491a4f97 100644 --- a/dev/_modules/pyhgf/utils/beliefs_propagation.html +++ b/dev/_modules/pyhgf/utils/beliefs_propagation.html @@ -7,7 +7,7 @@ - pyhgf.utils.beliefs_propagation — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.beliefs_propagation — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/fill_categorical_state_node.html b/dev/_modules/pyhgf/utils/fill_categorical_state_node.html index 8042b76d9..a0590118e 100644 --- a/dev/_modules/pyhgf/utils/fill_categorical_state_node.html +++ b/dev/_modules/pyhgf/utils/fill_categorical_state_node.html @@ -7,7 +7,7 @@ - pyhgf.utils.fill_categorical_state_node — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.fill_categorical_state_node — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/get_input_idxs.html b/dev/_modules/pyhgf/utils/get_input_idxs.html index 9a64d8466..3380b36ec 100644 --- a/dev/_modules/pyhgf/utils/get_input_idxs.html +++ b/dev/_modules/pyhgf/utils/get_input_idxs.html @@ -7,7 +7,7 @@ - pyhgf.utils.get_input_idxs — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.get_input_idxs — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/get_update_sequence.html b/dev/_modules/pyhgf/utils/get_update_sequence.html index 7157e0a9e..205b10dc7 100644 --- a/dev/_modules/pyhgf/utils/get_update_sequence.html +++ b/dev/_modules/pyhgf/utils/get_update_sequence.html @@ -7,7 +7,7 @@ - pyhgf.utils.get_update_sequence — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.get_update_sequence — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/list_branches.html b/dev/_modules/pyhgf/utils/list_branches.html index 5cabf3a63..1b6353511 100644 --- a/dev/_modules/pyhgf/utils/list_branches.html +++ b/dev/_modules/pyhgf/utils/list_branches.html @@ -7,7 +7,7 @@ - pyhgf.utils.list_branches — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.list_branches — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/remove_node.html b/dev/_modules/pyhgf/utils/remove_node.html index 68adc82dd..35d3f9dee 100644 --- a/dev/_modules/pyhgf/utils/remove_node.html +++ b/dev/_modules/pyhgf/utils/remove_node.html @@ -7,7 +7,7 @@ - pyhgf.utils.remove_node — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.remove_node — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/_modules/pyhgf/utils/to_pandas.html b/dev/_modules/pyhgf/utils/to_pandas.html index eeac3e908..350923b93 100644 --- a/dev/_modules/pyhgf/utils/to_pandas.html +++ b/dev/_modules/pyhgf/utils/to_pandas.html @@ -7,7 +7,7 @@ - pyhgf.utils.to_pandas — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.to_pandas — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git 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pyhgf.math.binary_surprise — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.math/pyhgf.math.binary_surprise_finite_precision.html b/dev/generated/pyhgf.math/pyhgf.math.binary_surprise_finite_precision.html index 733b66053..360aba775 100644 --- a/dev/generated/pyhgf.math/pyhgf.math.binary_surprise_finite_precision.html +++ b/dev/generated/pyhgf.math/pyhgf.math.binary_surprise_finite_precision.html @@ -8,7 +8,7 @@ - pyhgf.math.binary_surprise_finite_precision — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.math.binary_surprise_finite_precision — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.math/pyhgf.math.dirichlet_kullback_leibler.html b/dev/generated/pyhgf.math/pyhgf.math.dirichlet_kullback_leibler.html index f56bab4af..d0e6bf0fa 100644 --- a/dev/generated/pyhgf.math/pyhgf.math.dirichlet_kullback_leibler.html +++ 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ab8926391..7af0ed002 100644 --- a/dev/generated/pyhgf.math/pyhgf.math.sigmoid.html +++ b/dev/generated/pyhgf.math/pyhgf.math.sigmoid.html @@ -8,7 +8,7 @@ - pyhgf.math.sigmoid — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.math.sigmoid — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.HGF.html b/dev/generated/pyhgf.model/pyhgf.model.HGF.html index bc1bf2c33..f8c5a4980 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.HGF.html +++ b/dev/generated/pyhgf.model/pyhgf.model.HGF.html @@ -8,7 +8,7 @@ - pyhgf.model.HGF — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.HGF — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.Network.html b/dev/generated/pyhgf.model/pyhgf.model.Network.html index 9a43e8b2f..4726c5b53 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.Network.html +++ b/dev/generated/pyhgf.model/pyhgf.model.Network.html @@ -8,7 +8,7 @@ - pyhgf.model.Network — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.Network — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.add_binary_state.html b/dev/generated/pyhgf.model/pyhgf.model.add_binary_state.html index 999125bd0..a7833a127 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.add_binary_state.html +++ b/dev/generated/pyhgf.model/pyhgf.model.add_binary_state.html @@ -8,7 +8,7 @@ - pyhgf.model.add_binary_state — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.add_binary_state — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.add_categorical_state.html b/dev/generated/pyhgf.model/pyhgf.model.add_categorical_state.html index 0b21adacc..3fdf747ad 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.add_categorical_state.html +++ b/dev/generated/pyhgf.model/pyhgf.model.add_categorical_state.html @@ -8,7 +8,7 @@ - pyhgf.model.add_categorical_state — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.add_categorical_state — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.add_continuous_state.html b/dev/generated/pyhgf.model/pyhgf.model.add_continuous_state.html index 093112cd7..441fec92b 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.add_continuous_state.html +++ b/dev/generated/pyhgf.model/pyhgf.model.add_continuous_state.html @@ -8,7 +8,7 @@ - pyhgf.model.add_continuous_state — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.add_continuous_state — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.add_dp_state.html b/dev/generated/pyhgf.model/pyhgf.model.add_dp_state.html index 2fd16b7af..da75638d8 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.add_dp_state.html +++ b/dev/generated/pyhgf.model/pyhgf.model.add_dp_state.html @@ -8,7 +8,7 @@ - pyhgf.model.add_dp_state — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.add_dp_state — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.add_ef_state.html b/dev/generated/pyhgf.model/pyhgf.model.add_ef_state.html index ba9802784..d1a628a8f 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.add_ef_state.html +++ b/dev/generated/pyhgf.model/pyhgf.model.add_ef_state.html @@ -8,7 +8,7 @@ - pyhgf.model.add_ef_state — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.add_ef_state — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.get_couplings.html b/dev/generated/pyhgf.model/pyhgf.model.get_couplings.html index 691116f73..960b69520 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.get_couplings.html +++ b/dev/generated/pyhgf.model/pyhgf.model.get_couplings.html @@ -8,7 +8,7 @@ - pyhgf.model.get_couplings — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.get_couplings — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.insert_nodes.html b/dev/generated/pyhgf.model/pyhgf.model.insert_nodes.html index 0118e84a7..43801af41 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.insert_nodes.html +++ b/dev/generated/pyhgf.model/pyhgf.model.insert_nodes.html @@ -8,7 +8,7 @@ - pyhgf.model.insert_nodes — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.insert_nodes — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.model/pyhgf.model.update_parameters.html b/dev/generated/pyhgf.model/pyhgf.model.update_parameters.html index 78084c152..293017503 100644 --- a/dev/generated/pyhgf.model/pyhgf.model.update_parameters.html +++ b/dev/generated/pyhgf.model/pyhgf.model.update_parameters.html @@ -8,7 +8,7 @@ - pyhgf.model.update_parameters — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.model.update_parameters — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.plots/pyhgf.plots.plot_correlations.html b/dev/generated/pyhgf.plots/pyhgf.plots.plot_correlations.html index 538eabb8b..9471fc5f3 100644 --- a/dev/generated/pyhgf.plots/pyhgf.plots.plot_correlations.html +++ b/dev/generated/pyhgf.plots/pyhgf.plots.plot_correlations.html @@ -8,7 +8,7 @@ - pyhgf.plots.plot_correlations — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.plots.plot_correlations — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.plots/pyhgf.plots.plot_network.html b/dev/generated/pyhgf.plots/pyhgf.plots.plot_network.html index 6498e7f5f..b256af502 100644 --- a/dev/generated/pyhgf.plots/pyhgf.plots.plot_network.html +++ b/dev/generated/pyhgf.plots/pyhgf.plots.plot_network.html @@ -8,7 +8,7 @@ - pyhgf.plots.plot_network — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.plots.plot_network — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.plots/pyhgf.plots.plot_nodes.html b/dev/generated/pyhgf.plots/pyhgf.plots.plot_nodes.html index 74f8a8031..3a0fb2c22 100644 --- a/dev/generated/pyhgf.plots/pyhgf.plots.plot_nodes.html +++ b/dev/generated/pyhgf.plots/pyhgf.plots.plot_nodes.html @@ -8,7 +8,7 @@ - pyhgf.plots.plot_nodes — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.plots.plot_nodes — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.plots/pyhgf.plots.plot_trajectories.html b/dev/generated/pyhgf.plots/pyhgf.plots.plot_trajectories.html index b0ce58ef1..04db5f8e1 100644 --- a/dev/generated/pyhgf.plots/pyhgf.plots.plot_trajectories.html +++ b/dev/generated/pyhgf.plots/pyhgf.plots.plot_trajectories.html @@ -8,7 +8,7 @@ - pyhgf.plots.plot_trajectories — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.plots.plot_trajectories — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.response/pyhgf.response.binary_softmax.html b/dev/generated/pyhgf.response/pyhgf.response.binary_softmax.html index 8b9568f9e..0740222e1 100644 --- a/dev/generated/pyhgf.response/pyhgf.response.binary_softmax.html +++ b/dev/generated/pyhgf.response/pyhgf.response.binary_softmax.html @@ -8,7 +8,7 @@ - pyhgf.response.binary_softmax — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.response.binary_softmax — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.response/pyhgf.response.binary_softmax_inverse_temperature.html b/dev/generated/pyhgf.response/pyhgf.response.binary_softmax_inverse_temperature.html index e098906ab..f9b6ea886 100644 --- a/dev/generated/pyhgf.response/pyhgf.response.binary_softmax_inverse_temperature.html +++ b/dev/generated/pyhgf.response/pyhgf.response.binary_softmax_inverse_temperature.html @@ -8,7 +8,7 @@ - pyhgf.response.binary_softmax_inverse_temperature — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.response.binary_softmax_inverse_temperature — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.response/pyhgf.response.first_level_binary_surprise.html b/dev/generated/pyhgf.response/pyhgf.response.first_level_binary_surprise.html index d46c7231a..e6d51fa36 100644 --- a/dev/generated/pyhgf.response/pyhgf.response.first_level_binary_surprise.html +++ b/dev/generated/pyhgf.response/pyhgf.response.first_level_binary_surprise.html @@ -8,7 +8,7 @@ - pyhgf.response.first_level_binary_surprise — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.response.first_level_binary_surprise — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.response/pyhgf.response.first_level_gaussian_surprise.html b/dev/generated/pyhgf.response/pyhgf.response.first_level_gaussian_surprise.html index 6872a2952..3c7d27c0a 100644 --- a/dev/generated/pyhgf.response/pyhgf.response.first_level_gaussian_surprise.html +++ b/dev/generated/pyhgf.response/pyhgf.response.first_level_gaussian_surprise.html @@ -8,7 +8,7 @@ - pyhgf.response.first_level_gaussian_surprise — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.response.first_level_gaussian_surprise — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.response/pyhgf.response.total_gaussian_surprise.html b/dev/generated/pyhgf.response/pyhgf.response.total_gaussian_surprise.html index 1012c48da..84857d368 100644 --- a/dev/generated/pyhgf.response/pyhgf.response.total_gaussian_surprise.html +++ b/dev/generated/pyhgf.response/pyhgf.response.total_gaussian_surprise.html @@ -8,7 +8,7 @@ - pyhgf.response.total_gaussian_surprise — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.response.total_gaussian_surprise — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.posterior.categorical/pyhgf.updates.posterior.categorical.categorical_state_update.html b/dev/generated/pyhgf.updates.posterior.categorical/pyhgf.updates.posterior.categorical.categorical_state_update.html index c124ff1ef..6eccc2e49 100644 --- a/dev/generated/pyhgf.updates.posterior.categorical/pyhgf.updates.posterior.categorical.categorical_state_update.html +++ b/dev/generated/pyhgf.updates.posterior.categorical/pyhgf.updates.posterior.categorical.categorical_state_update.html @@ -8,7 +8,7 @@ - pyhgf.updates.posterior.categorical.categorical_state_update — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.posterior.categorical.categorical_state_update — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.continuous_node_posterior_update.html b/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.continuous_node_posterior_update.html index 13569f750..225f48e89 100644 --- a/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.continuous_node_posterior_update.html +++ b/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.continuous_node_posterior_update.html @@ -8,7 +8,7 @@ - pyhgf.updates.posterior.continuous.continuous_node_posterior_update — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.posterior.continuous.continuous_node_posterior_update — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.continuous_node_posterior_update_ehgf.html b/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.continuous_node_posterior_update_ehgf.html index 912ed4f9f..668ae779c 100644 --- a/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.continuous_node_posterior_update_ehgf.html +++ b/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.continuous_node_posterior_update_ehgf.html @@ -8,7 +8,7 @@ - pyhgf.updates.posterior.continuous.continuous_node_posterior_update_ehgf — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.posterior.continuous.continuous_node_posterior_update_ehgf — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.posterior_update_mean_continuous_node.html b/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.posterior_update_mean_continuous_node.html index 51b88f962..8dc295f94 100644 --- a/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.posterior_update_mean_continuous_node.html +++ b/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.posterior_update_mean_continuous_node.html @@ -8,7 +8,7 @@ - pyhgf.updates.posterior.continuous.posterior_update_mean_continuous_node — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.posterior.continuous.posterior_update_mean_continuous_node — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.posterior_update_precision_continuous_node.html b/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.posterior_update_precision_continuous_node.html index 6c5cc44e0..3cf3694b7 100644 --- a/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.posterior_update_precision_continuous_node.html +++ b/dev/generated/pyhgf.updates.posterior.continuous/pyhgf.updates.posterior.continuous.posterior_update_precision_continuous_node.html @@ -8,7 +8,7 @@ - pyhgf.updates.posterior.continuous.posterior_update_precision_continuous_node — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.posterior.continuous.posterior_update_precision_continuous_node — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.posterior.exponential/pyhgf.updates.posterior.exponential.posterior_update_exponential_family_dynamic.html b/dev/generated/pyhgf.updates.posterior.exponential/pyhgf.updates.posterior.exponential.posterior_update_exponential_family_dynamic.html index d341afd84..83ce4e3d8 100644 --- a/dev/generated/pyhgf.updates.posterior.exponential/pyhgf.updates.posterior.exponential.posterior_update_exponential_family_dynamic.html +++ b/dev/generated/pyhgf.updates.posterior.exponential/pyhgf.updates.posterior.exponential.posterior_update_exponential_family_dynamic.html @@ -8,7 +8,7 @@ - pyhgf.updates.posterior.exponential.posterior_update_exponential_family_dynamic — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.posterior.exponential.posterior_update_exponential_family_dynamic — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction.binary/pyhgf.updates.prediction.binary.binary_state_node_prediction.html b/dev/generated/pyhgf.updates.prediction.binary/pyhgf.updates.prediction.binary.binary_state_node_prediction.html index ed0cf3314..9785e3196 100644 --- a/dev/generated/pyhgf.updates.prediction.binary/pyhgf.updates.prediction.binary.binary_state_node_prediction.html +++ b/dev/generated/pyhgf.updates.prediction.binary/pyhgf.updates.prediction.binary.binary_state_node_prediction.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction.binary.binary_state_node_prediction — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction.binary.binary_state_node_prediction — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.continuous_node_prediction.html b/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.continuous_node_prediction.html index 4ab9620b8..5415412d6 100644 --- a/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.continuous_node_prediction.html +++ b/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.continuous_node_prediction.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction.continuous.continuous_node_prediction — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction.continuous.continuous_node_prediction — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.predict_mean.html b/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.predict_mean.html index dc55e9f1d..9b69b58fe 100644 --- a/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.predict_mean.html +++ b/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.predict_mean.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction.continuous.predict_mean — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction.continuous.predict_mean — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.predict_precision.html b/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.predict_precision.html index 2b1557cf2..df9688337 100644 --- a/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.predict_precision.html +++ b/dev/generated/pyhgf.updates.prediction.continuous/pyhgf.updates.prediction.continuous.predict_precision.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction.continuous.predict_precision — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction.continuous.predict_precision — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction.dirichlet/pyhgf.updates.prediction.dirichlet.dirichlet_node_prediction.html b/dev/generated/pyhgf.updates.prediction.dirichlet/pyhgf.updates.prediction.dirichlet.dirichlet_node_prediction.html index c186a6d41..0879fcbf2 100644 --- a/dev/generated/pyhgf.updates.prediction.dirichlet/pyhgf.updates.prediction.dirichlet.dirichlet_node_prediction.html +++ b/dev/generated/pyhgf.updates.prediction.dirichlet/pyhgf.updates.prediction.dirichlet.dirichlet_node_prediction.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction.dirichlet.dirichlet_node_prediction — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction.dirichlet.dirichlet_node_prediction — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.binary/pyhgf.updates.prediction_error.binary.binary_finite_state_node_prediction_error.html b/dev/generated/pyhgf.updates.prediction_error.binary/pyhgf.updates.prediction_error.binary.binary_finite_state_node_prediction_error.html index 59d8f4ea7..18eb8ed84 100644 --- a/dev/generated/pyhgf.updates.prediction_error.binary/pyhgf.updates.prediction_error.binary.binary_finite_state_node_prediction_error.html +++ b/dev/generated/pyhgf.updates.prediction_error.binary/pyhgf.updates.prediction_error.binary.binary_finite_state_node_prediction_error.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.binary.binary_finite_state_node_prediction_error — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.binary.binary_finite_state_node_prediction_error — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.binary/pyhgf.updates.prediction_error.binary.binary_state_node_prediction_error.html b/dev/generated/pyhgf.updates.prediction_error.binary/pyhgf.updates.prediction_error.binary.binary_state_node_prediction_error.html index 68ba77e22..c3b7ee200 100644 --- a/dev/generated/pyhgf.updates.prediction_error.binary/pyhgf.updates.prediction_error.binary.binary_state_node_prediction_error.html +++ b/dev/generated/pyhgf.updates.prediction_error.binary/pyhgf.updates.prediction_error.binary.binary_state_node_prediction_error.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.binary.binary_state_node_prediction_error — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.binary.binary_state_node_prediction_error — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git 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a/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_prediction_error.html b/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_prediction_error.html index dd69b6d27..8661a7abd 100644 --- a/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_prediction_error.html +++ b/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_prediction_error.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.continuous.continuous_node_prediction_error — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.continuous.continuous_node_prediction_error — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_value_prediction_error.html b/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_value_prediction_error.html index be302c7d1..eccc09a96 100644 --- a/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_value_prediction_error.html +++ b/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_value_prediction_error.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.continuous.continuous_node_value_prediction_error — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.continuous.continuous_node_value_prediction_error — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_volatility_prediction_error.html b/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_volatility_prediction_error.html index 9560f1f46..dc36cd3ee 100644 --- a/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_volatility_prediction_error.html +++ b/dev/generated/pyhgf.updates.prediction_error.continuous/pyhgf.updates.prediction_error.continuous.continuous_node_volatility_prediction_error.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.continuous.continuous_node_volatility_prediction_error — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.continuous.continuous_node_volatility_prediction_error — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.clusters_likelihood.html b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.clusters_likelihood.html index bb567c288..954201b5e 100644 --- a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.clusters_likelihood.html +++ b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.clusters_likelihood.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.dirichlet.clusters_likelihood — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.dirichlet.clusters_likelihood — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.create_cluster.html b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.create_cluster.html index acf695185..dad155522 100644 --- a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.create_cluster.html +++ b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.create_cluster.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.dirichlet.create_cluster — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.dirichlet.create_cluster — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.dirichlet_node_prediction_error.html b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.dirichlet_node_prediction_error.html index 439c4e633..9c515b0db 100644 --- a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.dirichlet_node_prediction_error.html +++ b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.dirichlet_node_prediction_error.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.dirichlet.dirichlet_node_prediction_error — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.dirichlet.dirichlet_node_prediction_error — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.get_candidate.html b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.get_candidate.html index aebce7d3a..ebac726cc 100644 --- a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.get_candidate.html +++ b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.get_candidate.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.dirichlet.get_candidate — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.dirichlet.get_candidate — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.likely_cluster_proposal.html b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.likely_cluster_proposal.html index ce73337fe..5fd05a930 100644 --- a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.likely_cluster_proposal.html +++ b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.likely_cluster_proposal.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.dirichlet.likely_cluster_proposal — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.dirichlet.likely_cluster_proposal — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.update_cluster.html b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.update_cluster.html index 791996eb3..5fffd1ed1 100644 --- a/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.update_cluster.html +++ b/dev/generated/pyhgf.updates.prediction_error.dirichlet/pyhgf.updates.prediction_error.dirichlet.update_cluster.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.dirichlet.update_cluster — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.dirichlet.update_cluster — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.exponential/pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_dynamic.html b/dev/generated/pyhgf.updates.prediction_error.exponential/pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_dynamic.html index 2394f59c3..0bea63ac3 100644 --- a/dev/generated/pyhgf.updates.prediction_error.exponential/pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_dynamic.html +++ b/dev/generated/pyhgf.updates.prediction_error.exponential/pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_dynamic.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_dynamic — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_dynamic — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.updates.prediction_error.exponential/pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_fixed.html b/dev/generated/pyhgf.updates.prediction_error.exponential/pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_fixed.html index fae1407fc..0dcbfab49 100644 --- a/dev/generated/pyhgf.updates.prediction_error.exponential/pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_fixed.html +++ b/dev/generated/pyhgf.updates.prediction_error.exponential/pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_fixed.html @@ -8,7 +8,7 @@ - pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_fixed — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.updates.prediction_error.exponential.prediction_error_update_exponential_family_fixed — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.add_edges.html b/dev/generated/pyhgf.utils/pyhgf.utils.add_edges.html index 06479457a..3aef7a40a 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.add_edges.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.add_edges.html @@ -8,7 +8,7 @@ - pyhgf.utils.add_edges — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.add_edges — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.add_parent.html b/dev/generated/pyhgf.utils/pyhgf.utils.add_parent.html index f6a5de8ea..1df26f378 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.add_parent.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.add_parent.html @@ -8,7 +8,7 @@ - pyhgf.utils.add_parent — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.add_parent — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.beliefs_propagation.html b/dev/generated/pyhgf.utils/pyhgf.utils.beliefs_propagation.html index f9291bb5e..edb583cd4 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.beliefs_propagation.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.beliefs_propagation.html @@ -8,7 +8,7 @@ - pyhgf.utils.beliefs_propagation — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.beliefs_propagation — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.fill_categorical_state_node.html b/dev/generated/pyhgf.utils/pyhgf.utils.fill_categorical_state_node.html index 25397bb93..25bffbfaa 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.fill_categorical_state_node.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.fill_categorical_state_node.html @@ -8,7 +8,7 @@ - pyhgf.utils.fill_categorical_state_node — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.fill_categorical_state_node — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.get_input_idxs.html b/dev/generated/pyhgf.utils/pyhgf.utils.get_input_idxs.html index 26b9bf404..2429053ca 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.get_input_idxs.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.get_input_idxs.html @@ -8,7 +8,7 @@ - pyhgf.utils.get_input_idxs — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.get_input_idxs — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.get_update_sequence.html b/dev/generated/pyhgf.utils/pyhgf.utils.get_update_sequence.html index 072b638bf..47ce70a4c 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.get_update_sequence.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.get_update_sequence.html @@ -8,7 +8,7 @@ - pyhgf.utils.get_update_sequence — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.get_update_sequence — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.list_branches.html b/dev/generated/pyhgf.utils/pyhgf.utils.list_branches.html index b099002d0..393d2e462 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.list_branches.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.list_branches.html @@ -8,7 +8,7 @@ - pyhgf.utils.list_branches — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.list_branches — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.remove_node.html b/dev/generated/pyhgf.utils/pyhgf.utils.remove_node.html index 8cc7a330f..60d63f1e7 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.remove_node.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.remove_node.html @@ -8,7 +8,7 @@ - pyhgf.utils.remove_node — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.remove_node — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/generated/pyhgf.utils/pyhgf.utils.to_pandas.html b/dev/generated/pyhgf.utils/pyhgf.utils.to_pandas.html index 9315d019d..745bfab0f 100644 --- a/dev/generated/pyhgf.utils/pyhgf.utils.to_pandas.html +++ b/dev/generated/pyhgf.utils/pyhgf.utils.to_pandas.html @@ -8,7 +8,7 @@ - pyhgf.utils.to_pandas — pyhgf 0.0.0.post1.dev0+dbad150 documentation + pyhgf.utils.to_pandas — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/genindex.html b/dev/genindex.html index e421dd45c..887e6d3b0 100644 --- a/dev/genindex.html +++ b/dev/genindex.html @@ -7,7 +7,7 @@ - Index — pyhgf 0.0.0.post1.dev0+dbad150 documentation + Index — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -42,7 +42,7 @@ - + diff --git a/dev/index.html b/dev/index.html index 4765cb11e..663511108 100644 --- a/dev/index.html +++ b/dev/index.html @@ -8,7 +8,7 @@ - PyHGF: A Neural Network Library for Predictive Coding — pyhgf 0.0.0.post1.dev0+dbad150 documentation + PyHGF: A Neural Network Library for Predictive Coding — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/learn.html b/dev/learn.html index 9c73e58b1..665d48097 100644 --- a/dev/learn.html +++ b/dev/learn.html @@ -8,7 +8,7 @@ - Learn — pyhgf 0.0.0.post1.dev0+dbad150 documentation + Learn — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + diff --git a/dev/notebooks/0.1-Theory.html b/dev/notebooks/0.1-Theory.html index 1fc403958..dc9b0f837 100644 --- a/dev/notebooks/0.1-Theory.html +++ b/dev/notebooks/0.1-Theory.html @@ -8,7 +8,7 @@ - Introduction to the Generalised Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+dbad150 documentation + Introduction to the Generalised Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + @@ -907,14 +907,14 @@

System configuration - Creating and manipulating networks of probabilistic nodes — pyhgf 0.0.0.post1.dev0+dbad150 documentation + Creating and manipulating networks of probabilistic nodes — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + @@ -758,7 +758,7 @@
Continuous value coupling -../_images/9441124f3e7925c11d392b9a4aa64ba23354ddddbd6d0612280d1843337b2323.png +../_images/280784175b8074b62fed60a1a8279c933b9de7b0fd2a0c63ecf8121a1d69701e.png
@@ -1111,16 +1111,16 @@

System configuration

diff --git a/dev/notebooks/0.3-Generalised_filtering.html b/dev/notebooks/0.3-Generalised_filtering.html index b29c81d92..7da9c01f0 100644 --- a/dev/notebooks/0.3-Generalised_filtering.html +++ b/dev/notebooks/0.3-Generalised_filtering.html @@ -8,7 +8,7 @@ - Generalised Bayesian Filtering of exponential family distributions — pyhgf 0.0.0.post1.dev0+dbad150 documentation + Generalised Bayesian Filtering of exponential family distributions — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + @@ -1106,17 +1106,17 @@

System configuration diff --git a/dev/notebooks/1.1-Binary_HGF.html b/dev/notebooks/1.1-Binary_HGF.html index fe18c358e..499e63721 100644 --- a/dev/notebooks/1.1-Binary_HGF.html +++ b/dev/notebooks/1.1-Binary_HGF.html @@ -8,7 +8,7 @@ - The binary Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+dbad150 documentation + The binary Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+c65e161 documentation @@ -43,7 +43,7 @@ - + @@ -55,7 +55,7 @@ - + @@ -783,7 +783,7 @@

Visualizing the model
-../_images/ecd192b619fcda3b40cdb5f737d2b936691486677eb7a4f82b5cbc7f55367e9e.svg +../_images/7d29572ae423fb4c8d4ea736f01dab651bf0ee09a3d53b5838bcf639ba2eaf01.svg
@@ -806,8 +806,8 @@

Sampling 
NUTS: [tonic_volatility_2]
-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 4 seconds.
 

 

@@ -823,7 +823,7 @@ 
Sampling
 

 
 

-../_images/f54c5b2c67834f5c33afc0b97d8a12f6b4e4c8ee108a3f3a5e1ec517416bf070.png
+../_images/7b763a10eecf9e229c51fc1ec5b98b5ab15b7008dd8bd28a470235d787d5ec4c.png
 

 
 
@@ -860,7 +860,7 @@ 
Using the learned parameters
-../_images/b2998bb5f0be8a6370728f28bea053fd3e1e9ac68ef3f8de9f7cdb6ba6929130.png
+../_images/4120e83acd6fd068aac34134402550c24c9831ddbb090e2f8c786d6c31b306d3.png
 
 
 

@@ -870,7 +870,7 @@ 
Using the learned parameters
-
Array(202.53006, dtype=float32)
+
Array(202.52956, dtype=float32)
 

 

 

@@ -922,7 +922,7 @@ 
Visualizing the model
-../_images/c220766790f0ac4c23d169d2a6b8286c1b66ca2bf50f19e9b1c2b87730c5efa1.svg
+../_images/2ec19856911096fbe9c3234ef83ab3600af54719c813af4a3f819412cb3c0342.svg
 

 

 
@@ -945,8 +945,8 @@ 
Sampling#
 
NUTS: [tonic_volatility_2, tonic_volatility_3]
 

 

-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 6 seconds.
 

 

@@ -964,7 +964,7 @@ 
Sampling#
 

 
 

-../_images/d06df607a1cdd92ac928fb7bc93a824eaf2897f54a56f72a67be116a237524fe.png
+../_images/89ea98b573eb008578a77ec200b10bf076a1e9a54ac94cc2464847d94fd27acd.png
 

 
 
@@ -1002,7 +1002,7 @@ 
Using the learned parameters
-../_images/30e5e0bb290ebd0015353211a0b9d60b8f548d961c28de5d42e1cc778f2d99ee.png
+../_images/e5bb7bfdc0af150454a57aca48137cd10bdd456593bdc1e4d15e939d2ab4a890.png
 
 
 

@@ -1012,7 +1012,7 @@ 
Using the learned parameters
-
Array(203.009, dtype=float32)
+
Array(203.01375, dtype=float32)
 

 

 

@@ -1036,17 +1036,17 @@ 
System configuration

diff --git a/dev/notebooks/1.2-Categorical_HGF.html b/dev/notebooks/1.2-Categorical_HGF.html
index cdd000f6f..483d484b1 100644
--- a/dev/notebooks/1.2-Categorical_HGF.html
+++ b/dev/notebooks/1.2-Categorical_HGF.html
@@ -8,7 +8,7 @@
     
     
 
-    The categorical Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    The categorical Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -567,7 +567,7 @@ 
Simulating a dataset
 

 

-../_images/d5ea208df46846708a270381ca42f5178a969195a62de40802882fa98991cc03.png
+../_images/f81da4ce63c873cf56adc0afb010ad9288aa6bdca75241a08824fd0b92e5e34b.png
 

 
 

@@ -681,7 +681,7 @@ 
Fitting the model forwards
-../_images/436064930c29b8dc24feb7445bb927266fc6875efe9f044b96579504fc8d268f.png
+../_images/b37ed6428bddaca0be1574c841328924ef97acbd33d5b763381af2a5f91de923.png
 

 
 
@@ -835,18 +835,18 @@ 
System configuration
diff --git a/dev/notebooks/1.3-Continuous_HGF.html b/dev/notebooks/1.3-Continuous_HGF.html
index 9fba660de..af3031990 100644
--- a/dev/notebooks/1.3-Continuous_HGF.html
+++ b/dev/notebooks/1.3-Continuous_HGF.html
@@ -8,7 +8,7 @@
     
     
 
-    The continuous Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    The continuous Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -55,7 +55,7 @@
     
     
     
-    
+    
     
     
     
@@ -857,8 +857,8 @@ 
Sampling
 
NUTS: [tonic_volatility_1]
 

 

-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 5 seconds.
 

 

@@ -875,11 +875,11 @@ 
Sampling
 

 
 

-
/tmp/ipykernel_3799/2516081684.py:2: UserWarning: The figure layout has changed to tight
+
/tmp/ipykernel_3845/2516081684.py:2: UserWarning: The figure layout has changed to tight
   plt.tight_layout()
 

 

-../_images/31878210ab8bc8e42f62a1d279ef8aea66d5431d81eccd7d48d7044bada6493f.png
+../_images/6868c6ba2f08be8bf2c9a604d4c4d7ae7448c5011b5ec7bf504aef0951a2f42d.png
 

 

 
@@ -914,7 +914,7 @@ 
Using the learned parameters
-../_images/8a7f25196202c5715909eebbb4cee2e77269c88e0409d302da86a99878ceae98.png
+../_images/184d5b9811d871939bc34fd679111ecf5a387c55701222a6cdb3fb141fa499c6.png
 

 
 

@@ -924,7 +924,7 @@ 
Using the learned parameters
-
Array(-1106.1058, dtype=float32)
+
Array(-1106.0717, dtype=float32)
 

 

 

@@ -997,9 +997,9 @@ 
Sampling#
 
NUTS: [tonic_volatility_1]
 

 

-

-

-
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 7 seconds.
+

+

+
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 8 seconds.
 

 

 
We recommend running at least 4 chains for robust computation of convergence diagnostics
@@ -1014,7 +1014,7 @@ 
Sampling#
 

 

 

-../_images/71b66212da1bc0f7ae468f43f787e263d16799dc001d08dd72951566f615f1c7.png
+../_images/bee5208bd524c79751c63095652cdad6671cf54c8393ca0cfe97ad4309c62db7.png
 

 

 
@@ -1048,7 +1048,7 @@ 
Using the learned parameters
-../_images/3f44f03c40a1408d814e0143a6022bd8649cbf08148b2cb6b71c6fb7a57b5abc.png
+../_images/da5252a4963dec663decb7db5409b2efbfb13a28684430224d32ef9091192415.png
 

 

 

@@ -1058,7 +1058,7 @@ 
Using the learned parameters
-
Array(-1118.0354, dtype=float32)
+
Array(-1118.0039, dtype=float32)
 

 

 

@@ -1082,17 +1082,17 @@ 
System configuration

diff --git a/dev/notebooks/2-Using_custom_response_functions.html b/dev/notebooks/2-Using_custom_response_functions.html
index 123e6eaee..e9a466bed 100644
--- a/dev/notebooks/2-Using_custom_response_functions.html
+++ b/dev/notebooks/2-Using_custom_response_functions.html
@@ -8,7 +8,7 @@
     
     
 
-    Using custom response models — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Using custom response models — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -55,7 +55,7 @@
     
     
     
-    
+    
     
     
     
@@ -867,8 +867,8 @@ 
Recovering HGF parameters from the observed behaviors
NUTS: [tonic_volatility_2]
 

 

-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 5 seconds.
 

 

@@ -917,19 +917,19 @@ 
Recovering HGF parameters from the observed behaviors
     
       tonic_volatility_2
-      -3.957
-      0.498
-      -4.848
-      -3.018
-      0.019
-      0.014
-      766.0
-      997.0
+      -3.937
+      0.507
+      -4.867
+      -2.946
+      0.018
+      0.013
+      781.0
+      1049.0
       1.0
     
   
 
-
../_images/55baec5374c3df09501195a65efa73e1cf494245c1f648934d09fd90566b3557.png
+../_images/e833eb8b5ce264f099e8724e3d2728738980f40812888ef4c962c988a146fc5f.png
 
 
 
The results above indicate that given the responses provided by the participant, the most likely values for the parameter \(\omega_2\) are between -4.9 and -3.1, with a mean at -3.9 (you can find slightly different values if you sample different actions from the decisions function). We can consider this as an excellent estimate given the sparsity of the data, and the complexity of the model.

@@ -963,18 +963,18 @@ 
System configuration
diff --git a/dev/notebooks/3-Multilevel_HGF.html b/dev/notebooks/3-Multilevel_HGF.html
index 00548d13f..20c37e4fd 100644
--- a/dev/notebooks/3-Multilevel_HGF.html
+++ b/dev/notebooks/3-Multilevel_HGF.html
@@ -8,7 +8,7 @@
     
     
 
-    Hierarchical Bayesian modelling with probabilistic neural networks — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Hierarchical Bayesian modelling with probabilistic neural networks — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -55,7 +55,7 @@
     
     
     
-    
+    
     
     
     
@@ -786,7 +786,7 @@ 
Plot the computational graph
-../_images/4779ff3b5faaa0ea280d5666923fd77e5e110d01ecfb615e713b0c9bfdc3a5c1.svg
+../_images/4a26b707a33e030d5c45a1f4e944945761de5b80b53cefb6aa1b93946163e208.svg
 
 
 
@@ -809,23 +809,14 @@ 
Sampling
 
NUTS: [mu_volatility, sigma_volatility, volatility, mu_temperature, sigma_temperature, inverse_temperature]
 

 

-

-

-
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 22 seconds.
-

-

-
There were 1000 divergences after tuning. Increase `target_accept` or reparameterize.
+

+

+
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 38 seconds.
 

 

 
We recommend running at least 4 chains for robust computation of convergence diagnostics
 

 

-
The rhat statistic is larger than 1.01 for some parameters. This indicates problems during sampling. See https://arxiv.org/abs/1903.08008 for details
-

-

-
The effective sample size per chain is smaller than 100 for some parameters.  A higher number is needed for reliable rhat and ess computation. See https://arxiv.org/abs/1903.08008 for details
-

-

 

 

 

@@ -852,7 +843,7 @@ 
Visualization of the posterior distributions
-../_images/f40369594f9bd79a678ea8f2c8e1da1dbb6688240993fc7b3e33d245058b129b.png
+../_images/5abaaced6cea8092bb4ec4206b471e6ab3c5c27ab5402b5269ffc25dde3ad5bb.png
 

 
 
The reference values on both posterior distributions indicate the mean of the distribution used for simulation.

@@ -879,17 +870,17 @@ 
Model comparison
Computed from 2000 posterior samples and 3200 observations log-likelihood matrix.
 
          Estimate       SE
-elpd_loo -2192.92    57.20
-p_loo      441.86        -
+elpd_loo -1684.28    25.60
+p_loo       18.03        -
 
 There has been a warning during the calculation. Please check the results.
 ------
 
 Pareto k diagnostic values:
                          Count   Pct.
-(-Inf, 0.70]   (good)     2097   65.5%
+(-Inf, 0.70]   (good)     3186   99.6%
    (0.70, 1]   (bad)         0    0.0%
-   (1, Inf)   (very bad) 1103   34.5%
+   (1, Inf)   (very bad)   14    0.4%
 

 
 
@@ -912,19 +903,19 @@ 
System configuration
diff --git a/dev/notebooks/4-Parameter_recovery.html b/dev/notebooks/4-Parameter_recovery.html
index 79e31c7a9..1e5ad074a 100644
--- a/dev/notebooks/4-Parameter_recovery.html
+++ b/dev/notebooks/4-Parameter_recovery.html
@@ -8,7 +8,7 @@
     
     
 
-    Recovering computational parameters from observed behaviours — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Recovering computational parameters from observed behaviours — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -53,7 +53,7 @@
     
     
     
-    
+    
     
     
     
@@ -653,12 +653,12 @@ 
Inference from the simulated behaviours
NUTS: [censored_volatility, inverse_temperature]
 

 
-

-

-
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 54 seconds.
+

+

+
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 66 seconds.
 

 

-
There were 1994 divergences after tuning. Increase `target_accept` or reparameterize.
+
There were 1998 divergences after tuning. Increase `target_accept` or reparameterize.
 

 

 
We recommend running at least 4 chains for robust computation of convergence diagnostics
@@ -728,7 +728,7 @@ 
Visualizing parameters recovery
-../_images/8b234deb4c25f0f67e9fda83cbe331eb4031c09b8eeefb0720fea24005b6d6d8.png
+../_images/ed5fb5bc4253363fe3d461d08f1425ed53cd16d154f73902ddcffc4f6c2f5b7a.png
 

 

 
@@ -749,18 +749,18 @@ 
System configuration
     
 
-    Non-linear value coupling between continuous state nodes — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Non-linear value coupling between continuous state nodes — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -976,17 +976,17 @@ 
System configuration

diff --git a/dev/notebooks/Example_1_Heart_rate_variability.html b/dev/notebooks/Example_1_Heart_rate_variability.html
index f3810a8ad..68076f3c7 100644
--- a/dev/notebooks/Example_1_Heart_rate_variability.html
+++ b/dev/notebooks/Example_1_Heart_rate_variability.html
@@ -8,7 +8,7 @@
     
     
 
-    Example 1: Bayesian filtering of cardiac volatility — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Example 1: Bayesian filtering of cardiac volatility — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -53,7 +53,7 @@
     
     
     
-    
+    
     
     
     
@@ -554,16 +554,16 @@ 
Loading and preprocessing physiological recording
Downloading ECG channel:   0%|          | 0/2 [00:00<?, ?it/s]
 

 

-
Downloading ECG channel:  50%|█████     | 1/2 [00:00<00:00,  1.10it/s]
+
Downloading ECG channel:  50%|█████     | 1/2 [00:00<00:00,  2.33it/s]
 

 

-
Downloading Respiration channel:  50%|█████     | 1/2 [00:00<00:00,  1.10it/s]
+
Downloading Respiration channel:  50%|█████     | 1/2 [00:00<00:00,  2.33it/s]
 

 

-
Downloading Respiration channel: 100%|██████████| 2/2 [00:01<00:00,  1.38it/s]
+
Downloading Respiration channel: 100%|██████████| 2/2 [00:01<00:00,  1.73it/s]
 

 

-
Downloading Respiration channel: 100%|██████████| 2/2 [00:01<00:00,  1.33it/s]
+
Downloading Respiration channel: 100%|██████████| 2/2 [00:01<00:00,  1.80it/s]
 

 

 

@@ -657,8 +657,8 @@ 
Model#<
 
NUTS: [tonic_volatility_2]
 

 

-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 9 seconds.
 

 

@@ -674,7 +674,7 @@ 
Model#<
 

 

 

-../_images/6fd29f084db1f587dbdbca39cbaad9ab38e0eae9287a2cf3d4e7f3e0d60d12f8.png
+../_images/e12221e7ddfa2b7cdd2508e1079926a4175704b138da2b0d08086c7386c78f2f.png
 

 

 

@@ -706,7 +706,7 @@ 
Model#<
 

 

 

-../_images/16b7b6df05c31358cc2642d8087b07e90333d05125939b201b740401654b3726.png
+../_images/c8207dcc591fe4eef954dde1b8cfe89b7b8c32f6de31037763126c1f39c11a49.png
 

 

 
@@ -727,17 +727,17 @@ 
System configuration
     
 
-    Example 2: Estimating the mean and precision of a time-varying Gaussian distributions — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Example 2: Estimating the mean and precision of a time-varying Gaussian distributions — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -680,15 +680,15 @@ 
System configuration
     
 
-    Example 3: A multi-armed bandit task with independent rewards and punishments — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Example 3: A multi-armed bandit task with independent rewards and punishments — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -55,7 +55,7 @@
     
     
     
-    
+    
     
     
     
@@ -1082,8 +1082,8 @@ 
Bayesian inference
NUTS: [omega]
 

 

-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 5 seconds.
 

 

@@ -1102,7 +1102,7 @@ 
Bayesian inference
-../_images/c2ec5c73a44f3ea4741eb3f35bc61ad413f8f254118e51d9d67cfc799864905d.png
+../_images/11c6a75a6f55a6904a408a95fe49b927fff7791486097c9f71f7ab7d50adaf32.png
 

 

 
@@ -1123,20 +1123,20 @@ 
System configuration

diff --git a/dev/notebooks/Exercise_1_Introduction_to_the_generalised_hierarchical_gaussian_filter.html b/dev/notebooks/Exercise_1_Introduction_to_the_generalised_hierarchical_gaussian_filter.html
index 276e1d613..4f8bf1749 100644
--- a/dev/notebooks/Exercise_1_Introduction_to_the_generalised_hierarchical_gaussian_filter.html
+++ b/dev/notebooks/Exercise_1_Introduction_to_the_generalised_hierarchical_gaussian_filter.html
@@ -8,7 +8,7 @@
     
     
 
-    Zurich CPC I: Introduction to the Generalised Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Zurich CPC I: Introduction to the Generalised Hierarchical Gaussian Filter — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -1020,17 +1020,17 @@ 
System configuration

diff --git a/dev/notebooks/Exercise_2_Bayesian_reinforcement_learning.html b/dev/notebooks/Exercise_2_Bayesian_reinforcement_learning.html
index e44a8a32a..eea9ab558 100644
--- a/dev/notebooks/Exercise_2_Bayesian_reinforcement_learning.html
+++ b/dev/notebooks/Exercise_2_Bayesian_reinforcement_learning.html
@@ -8,7 +8,7 @@
     
     
 
-    Zurich CPC II: Application to reinforcement learning — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Zurich CPC II: Application to reinforcement learning — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
@@ -55,7 +55,7 @@
     
     
     
-    
+    
     
     
     
@@ -703,8 +703,8 @@ 
Parameters optimization
NUTS: [tonic_volatility_2]
 

 

-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 4 seconds.
 

 

@@ -720,7 +720,7 @@ 
Parameters optimization
 

 

-../_images/d025a83a74bb822d57b494b8dce43fc5434adc23686211605e9bc3b6b3c35a06.png
+../_images/585371845e3e43380a5d687c919d467a61b90a049990119425e75fe4135cb55a.png
 

 

 

@@ -762,15 +762,15 @@ 
Parameters optimization
     
       tonic_volatility_2
-      -2.589
-      0.388
-      -3.345
-      -1.903
+      -2.597
+      0.409
+      -3.489
+      -1.964
+      0.02
       0.015
-      0.011
-      674.0
-      405.0
-      1.0
+      428.0
+      264.0
+      1.01
     
   
 
@@ -810,8 +810,8 @@ 
Biased random
NUTS: [bias]
 

 

-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 1 seconds.
 

 

@@ -827,7 +827,7 @@ 
Biased random
-../_images/104541dee629bc15fda1e7a3659348063fedcb68f6b3a1e17939b9137554c0af.png
+../_images/ebe0b8cb3f3999bd8188fc3ed8c0184f1bf606db12fa06b816776e5baa6af885.png
 

 

 
Assess model fitting, here using leave-one-out cross-validation from the Arviz library.

@@ -896,7 +896,7 @@ 
Rescorla-Wagner{"version_major": 2, "version_minor": 0, "model_id": "1c9c532314cb4e619d3af6d3e24dad8b"}
/opt/hostedtoolcache/Python/3.12.8/x64/lib/python3.12/multiprocessing/popen_fork.py:66: RuntimeWarning: os.fork() was called. os.fork() is incompatible with multithreaded code, and JAX is multithreaded, so this will likely lead to a deadlock.
+
/opt/hostedtoolcache/Python/3.12.8/x64/lib/python3.12/multiprocessing/popen_fork.py:66: RuntimeWarning: os.fork() was called. os.fork() is incompatible with multithreaded code, and JAX is multithreaded, so this will likely lead to a deadlock.
   self.pid = os.fork()
 

 

@@ -916,7 +916,7 @@ 
Rescorla-Wagner
-../_images/eaf1618b37840c04bfe506c0bd10a613f1d70e1cba558fc48a405f782ae90b9b.png
+../_images/30d3e3d7b03ff1b2ea62089e2c65cf5aaedb71a64b8ce60980e55e77f376e9b2.png
 

 

 
@@ -1004,8 +1004,8 @@ 
Two-level HGF
NUTS: [tonic_volatility_2]
 

 

-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 4 seconds.
 

 

@@ -1021,7 +1021,7 @@ 
Two-level HGF
-../_images/b86f7486149530399c06c352fb241b24839e056aa888f9aeea7b6a133f24fb30.png
+../_images/a8407d023e57e001a6bb0d8ea97a90317026f017c5999a55e875a62acf75c480.png
 

 
 
We have saved the pointwise log probabilities as a variable, here we simply move this variable to the log_likelihoo field of the idata object, so Arviz knows that this can be used later for model comparison.

@@ -1112,12 +1112,12 @@ 
Three-level HGF
NUTS: [tonic_volatility_2]
 

 
-

-

+

+

 
Sampling 2 chains for 1_000 tune and 1_000 draw iterations (2_000 + 2_000 draws total) took 5 seconds.
 

 

-
There were 50 divergences after tuning. Increase `target_accept` or reparameterize.
+
There were 69 divergences after tuning. Increase `target_accept` or reparameterize.
 

 

 
We recommend running at least 4 chains for robust computation of convergence diagnostics
@@ -1132,7 +1132,7 @@ 
Three-level HGF
-../_images/9dbf26954edd959dd84f0333ffb31b157873e7a0327b577f3ee85a64b163c620.png
+../_images/c28074c01b0bc626ef26666cf18ba2543eae9a4d3c8c350bf4915151860bd309.png
 

 

 
Move pointwise estimate into the likelihood field.

@@ -1205,11 +1205,11 @@ 
Model comparison
-../_images/6037c7efe4b61ebf811f3276bd4ff9e0ae75026ad168586f2fa8bada3d92c1fc.png
+../_images/85346a099581628dd1312c93d84f9658020922d399af6795bcc27b4b9161ba7c.png
 

 

 
Looking at the final result, we can see that the three-level HGF had the best predictive performance on the participant decision, suggesting that higher-level uncertainty is important here to understand the agent’s behaviour.

@@ -1378,7 +1378,7 @@ 
Beliefs trajectories
 
 

-../_images/bd8e0392cd67cb46904250d853f6d5cb37264ba3483fda1a981cf7be21e1b18b.png
+../_images/aa394735280ac987e906c6d7dd39f79fa321a2a8e57521f82ed99e9d58bf1b2a.png
 

 

 
The resulting samples show belief trajectories for 10 samples for each model (we are not depicting the biased random here for clarity). The trajectories are highly similar, but we can see that the two and three-level HGF are slightly adjusting their learning rates in a way that was more consistent with the observed behaviours.

@@ -1447,19 +1447,19 @@ 
System configuration
diff --git a/dev/py-modindex.html b/dev/py-modindex.html
index b5e0f0af2..698d32116 100644
--- a/dev/py-modindex.html
+++ b/dev/py-modindex.html
@@ -7,7 +7,7 @@
   
     
     
-    Python Module Index — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Python Module Index — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -42,7 +42,7 @@
   
 
 
-    
+    
     
     
     
diff --git a/dev/references.html b/dev/references.html
index 1b05bceb4..f0eab2fd5 100644
--- a/dev/references.html
+++ b/dev/references.html
@@ -8,7 +8,7 @@
     
     
 
-    References — pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    References — pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -43,7 +43,7 @@
   
 
 
-    
+    
     
     
     
diff --git a/dev/search.html b/dev/search.html
index bb7dd5616..af74762f2 100644
--- a/dev/search.html
+++ b/dev/search.html
@@ -6,7 +6,7 @@
 
   
     
-    Search - pyhgf 0.0.0.post1.dev0+dbad150 documentation
+    Search - pyhgf 0.0.0.post1.dev0+c65e161 documentation
   
   
   
@@ -41,7 +41,7 @@
   
 
 
-    
+    
     
     
     
diff --git a/dev/searchindex.js b/dev/searchindex.js
index 4740b52df..aa137e835 100644
--- a/dev/searchindex.js
+++ b/dev/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"alltitles": {"": [[84, "exercise1.1"], [84, "exercise1.2"], [84, "exercise1.3"], [84, "exercise1.4"], [84, "exercise1.5"], [84, "exercise1.6"], [85, "exercise2.1"], [85, "exercise2.2"]], "API": [[0, "api"]], "Acknowledgments": [[69, "acknowledgments"]], "Add data": [[74, "add-data"], [74, "id4"], [76, "add-data"], [76, "id3"]], "Adding a drift to the random walk": [[71, "adding-a-drift-to-the-random-walk"]], "Autoregressive processes": [[71, "autoregressive-processes"]], "Bayesian inference": [[83, "bayesian-inference"]], "Beliefs trajectories": [[85, "beliefs-trajectories"]], "Biased random": [[85, "biased-random"]], "Binary nodes": [[0, "binary-nodes"]], "Binary state nodes": [[0, "binary-state-nodes"]], "Categorical nodes": [[0, "categorical-nodes"]], "Categorical state nodes": [[0, "categorical-state-nodes"]], "Continuous nodes": [[0, "continuous-nodes"], [0, "id1"]], "Continuous state nodes": [[0, "continuous-state-nodes"]], "Continuous value coupling": [[72, 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