Bug: Pipelines created programmatically are deleted on restart

[lyuboxa]

Bug description

When using Conduit's provisioning API in an embedded way to provision pipeline, the provisioned pipelines
are removed from runtime upon restart. My understanding is that on startup pipelines which are not available locally
as files, will be deleted.

Steps to reproduce

1. Provision pipeline through the provisioning pkg (using Import())
2. Wait for pipeline to start
3. Stop conduit process
4. Start conduit process
5. Provisioned pipeline will be deleted.

Version

latest

[simonl2002]

Larger issue here is we should think about how we want to expose Conduit programmatically.
Meroxa platform team has a workaround here. But we will work on this.