install.sh

#!/bin/bash
# #!/usr/bin/env bash

set -e

ENV_NAME=tagger

echo
echo "
 _______
|__   __|
   | | __ _  __ _  __ _  ___ _ __
   | |/ _  |/ _  |/ _  |/ _ \ '__|
   | | (_| | (_| | (_| |  __/ |
   |_|\__,_|\__, |\__, |\___|_|
             __/ | __/ |
            |___/ |___/
####"
echo "This repo contains the source codes for the publication at https://arxiv.org/abs/1606.06724"
echo "For further detailed mathematical details, please take a look at the Arxiv paper."
echo "For implementation & experimentation details, please open an issue at github!"
echo
echo "####"


echo "Step 1:"
echo "...downloading the dataset:"
if [ -f ./data/freq20-1MNIST_compressed.h5 ]
    then
        echo 'freq20-1MNIST_compressed.h5 exists. Skipping download.'
    else
        wget http://cdn.cai.fi/datasets/freq20-1MNIST_compressed.h5 -P ./data/
fi
if [ -f ./data/freq20-2MNIST_compressed.h5 ]
    then
        echo 'freq20-2MNIST_compressed.h5 exists. Skipping download.'
    else
        wget http://cdn.cai.fi/datasets/freq20-2MNIST_compressed.h5 -P ./data/
fi
if [ -f ./data/shapes50k_20x20_compressed.h5 ]
    then
        echo 'shapes50k_20x20_compressed.h5 exists. Skipping download.'
    else
        wget http://cdn.cai.fi/datasets/shapes50k_20x20_compressed_v2.h5 -P ./data/
        mv ./data/shapes50k_20x20_compressed_v2.h5 ./data/shapes50k_20x20_compressed.h5
fi
echo "...dataset download done!"


echo "Step 2:"
echo "...setup the environment"
if type conda &> /dev/null
    then
        echo "Anaconda exists in $PATH, will create a $ENV_NAME virtual environment."
        if conda env list | grep $ENV_NAME$ &> /dev/null
        then
            echo "anaconda environment $ENV_NAME already exits. Update? (y/n)"
            read update_conda
            if [ $update_conda == 'y' ]
            then
                conda env update -f ./environment.yml
            else
                echo 'environemnt update is aborted. Please check your anaconda environment.'
                exit 1
            fi
        else
            conda env create -f ./environment.yml
        fi
    else
        echo "Anaconda do not exists, consider installing?"
        echo "With anaconda, the execution environment will be replicated."
        echo "As always, one can create the virtualenv without anaconda, but the code is not tested against that."
        echo "...Aborting"
        exit 1
fi
echo "...environment setup done!"

echo "Step 3:"
echo "...Checking environment works"
source activate $ENV_NAME
python -c "import theano.tensor as T; x = T.fscalar('x'); y = T.fscalar('y'); z = x + y; assert 2 == int(z.eval({x: 1, y: 1}))"
echo "theano installation seems to be OK"
echo "Omitting Fuels setup validation, please refer to http://fuel.readthedocs.io/en/latest/built_in_datasets.html#environment-variable"
echo "If the problem persists, please open an issue here at github!"
echo "...environment validation done!"


echo "Step 4:"
echo "...Initializing gitsubmodule"
git submodule update --init
echo "git submodule updated"
echo "...git submodule installation done"


echo "Step 5:"
echo "...Downloading pretrained models"
if [ -f ./pretrained_models/mnist-results/trained_params.npz ]
    then
        echo 'pretrained_models/mnist-results/trained_params.npz exists. Skipping download.'
    else
        wget http://cdn.cai.fi/pretrained-models/freq20-2MNIST_trained_params_20160803.npz -P ./pretrained_models/mnist-results/
        mv ./pretrained_models/mnist-results/freq20-2MNIST_trained_params_20160803.npz ./pretrained_models/mnist-results/trained_params.npz
fi
if [ -f ./pretrained_models/shapes-results/trained_params.npz ]
    then
        echo 'pretrained_models/shapes-results/trained_params.npz exists. Skipping download.'
    else
        wget http://cdn.cai.fi/pretrained-models/shapes50k20x20_trained_params_20160803.npz -P ./pretrained_models/shapes-results/
        mv ./pretrained_models/shapes-results/shapes50k20x20_trained_params_20160803.npz ./pretrained_models/shapes-results/trained_params.npz
fi

echo "####"
echo "Please run 'source activate $ENV_NAME' to enable your environment."
echo "####"

echo "Happy tinkering!"