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Have a look at https://github.com/fbreitwieser/pavian for visual analysis of results generated with Centrifuge!

+ Have a look at https://github.com/fbreitwieser/pavian for visual analysis of results generated with Centrifuge! + +

Due to the rapid spread of SARS-CoV-2 and its devastating effects, we provide two additional Centrifuge indices in the hope that they will be useful for biomedical research related to the virus. The first two indexes include 106 complete SARS-CoV-2 genomes downloaded from GenBank as follows: (3/29/2020)

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Centrifuge 1.0.4-beta release 6/5/2018

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Centrifuge 1.0.3 release 2/23/2018

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Centrifuge 1.0.3-beta release 12/06/2016