From a48f8ebc3a78c05b4233c90b0c419d1951dabd65 Mon Sep 17 00:00:00 2001 From: "Michael R. Crusoe" <1330696+mr-c@users.noreply.github.com> Date: Mon, 6 May 2024 15:56:25 +0200 Subject: [PATCH] biocontainer tests: use version corresponding to v2 Docker Image Format (#4912) Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> --- src/toil/test/cwl/cwlTest.py | 2 +- src/toil/test/cwl/seqtk_seq.cwl | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/src/toil/test/cwl/cwlTest.py b/src/toil/test/cwl/cwlTest.py index 50091c8346..db3df9d657 100644 --- a/src/toil/test/cwl/cwlTest.py +++ b/src/toil/test/cwl/cwlTest.py @@ -502,7 +502,7 @@ def test_default_args(self) -> None: "src/toil/test/cwl/seqtk_seq.cwl", "src/toil/test/cwl/seqtk_seq_job.json", self._expected_seqtk_output(self.outDir), - main_args=["--default-container", "quay.io/biocontainers/seqtk:r93--0"], + main_args=["--default-container", "quay.io/biocontainers/seqtk:1.4--he4a0461_1"], out_name="output1", ) diff --git a/src/toil/test/cwl/seqtk_seq.cwl b/src/toil/test/cwl/seqtk_seq.cwl index b97d6c25e6..d629ee0c7c 100644 --- a/src/toil/test/cwl/seqtk_seq.cwl +++ b/src/toil/test/cwl/seqtk_seq.cwl @@ -21,4 +21,4 @@ hints: packages: - package: seqtk version: - - r93 + - '1.4'