feat: improve `Trainer` and `DeeprankDataset` logic for production testing#515

Merged

gcroci2 merged 63 commits intodevfrom 510_testing_pre_trained_gcroci2

Jan 3, 2024

+867-352

Commits on Oct 19, 2023

add relevant attributes to the Trainer and improve their logic
gcroci2
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add tests for testing when no test is provided and when no mmodel is loaded/trained
gcroci2
committed

Commits on Oct 23, 2023

Commits on Oct 24, 2023

fix datasets for cases in which there is a target attribute but no target values are present in the hdf5 file/s
gcroci2
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fix Trainer _eval method for cases in which there is a target attribute but no target values are present in the hdf5 file/s
gcroci2
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add logic for checking the target settings in the init, and fix _filter_targets
gcroci2
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add tests for cases with no target and improve target's filter tests
gcroci2
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fix tests according to the new target's checks
gcroci2
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add hdf5 file with no target
gcroci2
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add new file with no target
gcroci2
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Merge branch '510_testing_pre_trained_gcroci2' of https://github.com/DeepRank/deeprank2 into 510_testing_pre_trained_gcroci2
gcroci2
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add test for verifying that the testing output is correct when target is not present
gcroci2
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fix prospector errors
gcroci2
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fix build with python 3.11
gcroci2
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try to fix geometric installation using pip instead of conda
gcroci2
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fix prospector error
gcroci2
committed

Commits on Oct 25, 2023

add docs for testing a pre-trained model
gcroci2
committed

Commits on Oct 30, 2023

fix bug in trainer for testing cases with no target
gcroci2
committed

Commits on Nov 22, 2023

Commits on Nov 24, 2023

Update docs/getstarted.md

gcroci2
and
DaniBodor
authored