diff --git a/panpipes/panpipes/pipeline_ingest/pipeline.yml b/panpipes/panpipes/pipeline_ingest/pipeline.yml index c7b3b5f1..20f1c391 100644 --- a/panpipes/panpipes/pipeline_ingest/pipeline.yml +++ b/panpipes/panpipes/pipeline_ingest/pipeline.yml @@ -1,7 +1,8 @@ # ============================================================ # Ingest workflow Panpipes (pipeline_ingest.py) # ============================================================ -# This file contains the parameters for the ingest workflow. For descriptions of the parameters, see the documentation at TODO +# This file contains the parameters for the ingest workflow. +For descriptions of the parameters, see the documentation at TODO #-------------------------- @@ -78,6 +79,7 @@ scr: # RNA modality Quality Control # Providing a gene list +# see documentation at https://panpipes-pipelines.readthedocs.io/en/latest/usage/gene_list_format.html# custom_genes_file: resources/qc_genelist_1.0.csv # Defining actions on the genes