diff --git a/panpipes/panpipes/pipeline_integration.py b/panpipes/panpipes/pipeline_integration.py index edc93418..83d5e5e5 100644 --- a/panpipes/panpipes/pipeline_integration.py +++ b/panpipes/panpipes/pipeline_integration.py @@ -558,7 +558,7 @@ def run_totalvi(outfile): if PARAMS['multimodal_column_categorical'] is not None: - cmd += "--integration_col_categorical %(multimodal_column_categorical)s " + cmd += " --integration_col_categorical %(multimodal_column_categorical)s " neighbor_params = PARAMS['multimodal']['neighbors'] if neighbor_params['method'] is not None: cmd += " --neighbors_method %s" % neighbor_params['method'] @@ -599,7 +599,7 @@ def run_multivi(outfile): if PARAMS['multimodal_column_categorical'] is not None: - cmd += "--integration_col_categorical %(multimodal_column_categorical)s " + cmd += " --integration_col_categorical %(multimodal_column_categorical)s " if PARAMS['multimodal_column_continuous'] is not None: cmd += "--integration_col_continuous %(multimodal_column_continuous)s "