diff --git a/panpipes/panpipes/pipeline_integration/pipeline.yml b/panpipes/panpipes/pipeline_integration/pipeline.yml index 8b52ff82..41b3f1d5 100644 --- a/panpipes/panpipes/pipeline_integration/pipeline.yml +++ b/panpipes/panpipes/pipeline_integration/pipeline.yml @@ -113,7 +113,7 @@ prot: # ATAC modality atac: run: False - dimred: LSI + dimred: PCA tools: column: sample_id