From ebf9d599981164cbc9e3a8bd15e5c1e067c37225 Mon Sep 17 00:00:00 2001 From: Fabiola Curion Date: Tue, 23 Apr 2024 10:55:19 +0200 Subject: [PATCH] Update gene_list_format.md mouse path --- docs/usage/gene_list_format.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/usage/gene_list_format.md b/docs/usage/gene_list_format.md index 1c5b6aaf..52e98550 100644 --- a/docs/usage/gene_list_format.md +++ b/docs/usage/gene_list_format.md @@ -43,7 +43,7 @@ For a typical usecase, we provide example lists on our [github page](https://git The human-only cellcycle genes used in [scanpy.score_genes_cell_cycle](https://scanpy.readthedocs.io/en/stable/generated/scanpy.tl.score_genes_cell_cycle.html) are stored in [resources/cell_cycle_genes.csv](https://github.com/DendrouLab/panpipes/blob/main/panpipes/resources/cell_cycle_genes.tsv) -However, if you are working with mouse data, we supply an alternative cellcycle gene list with murine genes, which can be found in [resources/mouse_cell_cycle_genes.tsv](https://github.com/DendrouLab/panpipes/blob/mouse_cell_cycle/panpipes/resources/mouse_cell_cycle_genes.tsv) +However, if you are working with mouse data, we supply an alternative cellcycle gene list with murine genes, which can be found in [resources/mouse_cell_cycle_genes.tsv](https://github.com/DendrouLab/panpipes/blob/main/panpipes/resources/mouse_cell_cycle_genes.tsv) Differently from the other custom gene file, the cell cycle file should be a **tab separated file with two columns**: