From 0cb5ce197b0a3863537fc32344c60924e3b1f7c9 Mon Sep 17 00:00:00 2001
From: Fabiola Curion <fabiola.curion@gmail.com>
Date: Thu, 14 Mar 2024 17:23:01 +0100
Subject: [PATCH] Update pipeline.yml

removed default from score_genes
---
 panpipes/panpipes/pipeline_ingest/pipeline.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/panpipes/panpipes/pipeline_ingest/pipeline.yml b/panpipes/panpipes/pipeline_ingest/pipeline.yml
index 0bf550f7..c5ee70b5 100644
--- a/panpipes/panpipes/pipeline_ingest/pipeline.yml
+++ b/panpipes/panpipes/pipeline_ingest/pipeline.yml
@@ -86,7 +86,7 @@ custom_genes_file: resources/qc_genelist_1.0.csv
 
 # (for pipeline_ingest.py)
 calc_proportions: hb,mt,rp
-score_genes: MarkersNeutro
+score_genes: 
 
 # cell cycle action
 ccgenes: default