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Old harmonised data missing yaml files #1457

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jiyue1214 opened this issue Oct 9, 2024 · 1 comment

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jiyue1214 commented Oct 9, 2024

There are some old studies in the format:
GCST123456

*******.gz
harmonised
- GCST123456.f.tsv.gz
- GCST123456.h.tsv.gz
But missing the yaml file for harmonised data

Solutions: if the raw data did not start with the GCST, keep them as they are, generating a yaml file for the harmonised data.

jiyue1214 self-assigned this

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jiyue1214 commented Oct 9, 2024

There are 543 studies in the same situation: /nfs/production/keane/amp/AMP_harmonization/harmonization/test/no_yaml/check_files.txt

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