README.md

Metadata API

Metadata API for projects that follow the SRA model, such as those submitted to the EGA, EVA and AMP T2D.

Available documentation:

• Setting up local development environment
• Running the import pipeline
  • Running the import
  • Reference sequence import
  • Technology type import
  • Handling missing and suppressed entities during import
• Using the metadata service
  • Using the service
  • Release date control
  • Security

Tests

The profile for testing in a non-Travis environment requires an ENA database connection to be configured.

Unfortunately the corresponding properties can't be populated using a Maven profile because they are defined inside the src/test/resources folder, so they must be explicitly set before running said tests.