diff --git a/.bumpversion.cfg b/.bumpversion.cfg index c73055fe..047500f6 100644 --- a/.bumpversion.cfg +++ b/.bumpversion.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 2.2.3 +current_version = 2.2.4 commit = False tag = False diff --git a/CHANGELOG.md b/CHANGELOG.md index 79546be1..4cc7e4e0 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,3 +1,13 @@ +# Version 2.2.4 + +Fix the Github Action tests, moving to use only Python 3.7+ (due to AsyncIO), and updated the documentation. + +Fix [#385](https://github.com/EI-CoreBioinformatics/mikado/issues/385): clarified and corrected the tutorial for Daijin. +Fix [#389](https://github.com/EI-CoreBioinformatics/mikado/issues/389): Mikado now can theoretically output BED12 files from Mikado prepare. This is still +Fix [#395](https://github.com/EI-CoreBioinformatics/mikado/issues/395): corrected an issue in mikado prepare that left models with incorrect proteins in the input annotations. This caused mikado pick to crash during the padding procedure. +Fix [#396](https://github.com/EI-CoreBioinformatics/mikado/issues/396): corrected and clarified the errors related to missing configuration files (e.g. incorrect scoring files being provided). +Fix [#397](https://github.com/EI-CoreBioinformatics/mikado/issues/397): corrected a small bug in mikado prepare, when providing the input files through the CLI rather than through the configuration file. + # Version 2.2.3 Testing Mikado also on OSX, and adding OSX to the supported OSes in Conda. diff --git a/Mikado/version.py b/Mikado/version.py index f394e699..62fa04d7 100644 --- a/Mikado/version.py +++ b/Mikado/version.py @@ -1 +1 @@ -__version__ = "2.2.3" +__version__ = "2.2.4" diff --git a/setup.py b/setup.py index a0553362..9f829fa8 100644 --- a/setup.py +++ b/setup.py @@ -57,7 +57,7 @@ setup( name="Mikado", python_requires=">3.6", - version="2.2.3", + version="2.2.4", description="A Python3 annotation program to select the best gene model in each locus", long_description=long_description, url="https://github.com/EI-CoreBioinformatics/mikado",