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A deep learning framework for lung cancer prediction built with Lasagne/Theano

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EliasVansteenkiste/dsb3

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configs_class_dsb
configs_class_dsb
 
 
configs_fpred_patch
configs_fpred_patch
 
 
configs_fpred_scan
configs_fpred_scan
 
 
configs_gen_features
configs_gen_features
 
 
configs_luna_props_patch
configs_luna_props_patch
 
 
configs_luna_props_scan
configs_luna_props_scan
 
 
configs_luna_size_patch
configs_luna_size_patch
 
 
configs_seg_patch
configs_seg_patch
 
 
configs_seg_scan
configs_seg_scan
 
 
sandbox
sandbox
 
 
scripts
scripts
 
 
.gitignore
.gitignore
 
 
GenerateSolution.txt
GenerateSolution.txt
 
 
LICENSE
LICENSE
 
 
README.md
README.md
 
 
SETTINGS.json
SETTINGS.json
 
 
SETTINGS_user.json
SETTINGS_user.json
 
 
WinningModelDocumentation.pdf
WinningModelDocumentation.pdf
 
 
analyze_dsb_pixel_spacings.py
analyze_dsb_pixel_spacings.py
 
 
blobs_detection.py
blobs_detection.py
 
 
buffering.py
buffering.py
 
 
configuration.py
configuration.py
 
 
data_iterators.py
data_iterators.py
 
 
data_transforms.py
data_transforms.py
 
 
dsb_test_patient_segment.py
dsb_test_patient_segment.py
 
 
evaluate_dsb_fpred_scan.py
evaluate_dsb_fpred_scan.py
 
 
evaluate_luna_fpred_scan.py
evaluate_luna_fpred_scan.py
 
 
evaluate_luna_seg_scan.py
evaluate_luna_seg_scan.py
 
 
evaluate_submission.py
evaluate_submission.py
 
 
generate_dsb_histogram.py
generate_dsb_histogram.py
 
 
generate_features_dsb.py
generate_features_dsb.py
 
 
generate_luna_histograms.py
generate_luna_histograms.py
 
 
logger.py
logger.py
 
 
luna_test_patient_segment.py
luna_test_patient_segment.py
 
 
lung_segmentation.py
lung_segmentation.py
 
 
make_final_split.py
make_final_split.py
 
 
metadata_files.tgz
metadata_files.tgz
 
 
nn_lung.py
nn_lung.py
 
 
paard_gpu1.sh
paard_gpu1.sh
 
 
pathfinder.py
pathfinder.py
 
 
pixel_spacings_dsb.pkl
pixel_spacings_dsb.pkl
 
 
plot_dsb_roi.py
plot_dsb_roi.py
 
 
plot_learning_curves.py
plot_learning_curves.py
 
 
plot_luna_roi.py
plot_luna_roi.py
 
 
test_a6_dsb.py
test_a6_dsb.py
 
 
test_class_dsb.py
test_class_dsb.py
 
 
test_class_dsb_tta.py
test_class_dsb_tta.py
 
 
test_fpred_patch.py
test_fpred_patch.py
 
 
test_fpred_scan.py
test_fpred_scan.py
 
 
test_fpred_scan_dsb.py
test_fpred_scan_dsb.py
 
 
test_luna_props_scan_dsb.py
test_luna_props_scan_dsb.py
 
 
test_luna_size_scan_dsb.py
test_luna_size_scan_dsb.py
 
 
test_lung_seg_scan.py
test_lung_seg_scan.py
 
 
test_lung_seg_scan_luna.py
test_lung_seg_scan_luna.py
 
 
test_seg_patch.py
test_seg_patch.py
 
 
test_seg_scan.py
test_seg_scan.py
 
 
test_seg_scan_dsb.py
test_seg_scan_dsb.py
 
 
test_seg_scan_dsb_prl.py
test_seg_scan_dsb_prl.py
 
 
train_class_dsb.py
train_class_dsb.py
 
 
train_class_dsb_feed_patch_loc.py
train_class_dsb_feed_patch_loc.py
 
 
train_fpred_patch.py
train_fpred_patch.py
 
 
train_luna_prop_patch.py
train_luna_prop_patch.py
 
 
train_luna_size_patch.py
train_luna_size_patch.py
 
 
train_props_patch.py
train_props_patch.py
 
 
train_seg_patch.py
train_seg_patch.py
 
 
utils.py
utils.py
 
 
utils_lung.py
utils_lung.py
 
 
utils_plots.py
utils_plots.py
 
 

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A deep learning framework for lung cancer prediction built with Lasagne/Theano

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