From d71a140a9099b256dde4849a8c2b47a6f56a5ceb Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=E2=80=98ens-ftricomi=E2=80=99?= Date: Wed, 6 Sep 2023 09:35:21 +0100 Subject: [PATCH] modified dust test --- tests/test_dust.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/tests/test_dust.py b/tests/test_dust.py index 2a1abaa..4bef34b 100644 --- a/tests/test_dust.py +++ b/tests/test_dust.py @@ -3,7 +3,7 @@ import shutil from pathlib import Path from unittest.mock import patch -from src.python.ensembl.tools.anno.repeat_annotation.dust import run_dust # Replace 'your_module' with the actual module path +from src.python.ensembl.tools.anno.repeat_annotation.dust import run_dust class TestDust(unittest.TestCase): @@ -19,7 +19,7 @@ def test_run_dust(self): # Define test input values genome_file = "path/to/your/genome.fasta" output_dir = self.temp_dir - dust_bin = "dust" + dust_bin = "dustmasker" num_threads = 2 # Set the number of threads for testing # Mock any external dependencies or subprocess calls