diff --git a/.github/workflows/documentation.yaml b/.github/workflows/documentation.yaml
index bf53f71..705d5d1 100644
--- a/.github/workflows/documentation.yaml
+++ b/.github/workflows/documentation.yaml
@@ -20,5 +20,5 @@ jobs:
         with:
           publish_branch:  gh-pages
           github_token: ${{ secrets.GITHUB_TOKEN }}
-          publish_dir: docs/build
+          publish_dir: ./docs/build 
           force_orphan: true
\ No newline at end of file
diff --git a/docs/source/conf.py b/docs/source/conf.py
index 9eb9bc2..cad26d6 100644
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -44,7 +44,7 @@
 copyright_owner = "EMBL-European Bioinformatics Institute"
 copyright_dates = "[2016-%d]" % datetime.datetime.now().year
 copyright = copyright_dates + " " + copyright_owner
-
+html_baseurl = 'https://ensembl.github.io/ensembl-anno/'
 
 # -- General configuration ---------------------------------------------------
 # https://www.sphinx-doc.org/en/master/usage/configuration.html#general-configuration