From ff547043dd314f48376bbddc07d66445b6614fc4 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?=E2=80=98ens-ftricomi=E2=80=99?= <ftricomi@ebi.ac.uk>
Date: Wed, 27 Sep 2023 17:07:34 +0100
Subject: [PATCH] yaml to _modules

---
 .github/workflows/documentation.yaml | 29 +++++++++++++++++++---------
 1 file changed, 20 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/documentation.yaml b/.github/workflows/documentation.yaml
index 75f8d4c..4c1470f 100644
--- a/.github/workflows/documentation.yaml
+++ b/.github/workflows/documentation.yaml
@@ -4,13 +4,24 @@ permissions:
     contents: write
 jobs:
   docs:
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
-    - id: deployment
-      uses: sphinx-notes/pages@v3
-      with:
-        publish: false
-    - uses: peaceiris/actions-gh-pages@v3
-      with:
-        github_token: ${{ secrets.GITHUB_TOKEN }}
-        publish_dir: ${{ steps.deployment.outputs.artifact }}
\ No newline at end of file
+      - uses: actions/checkout@v3
+      - uses: actions/setup-python@v3
+      - name: Install dependencies
+        run: |
+          pip install sphinx
+      - name: Debug
+        run: |
+          echo "GitHub Workspace: $GITHUB_WORKSPACE"
+      - name: Sphinx build
+        run: |
+          sphinx-build -build -b html  $GITHUB_WORKSPACE/docs/source $GITHUB_WORKSPACE/docs/build
+      - name: Deploy
+        uses: peaceiris/actions-gh-pages@v3
+        if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/dev/python_repo' }}
+        with:
+          publish_branch:  gh-pages
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          publish_dir: /docs/build/_modules
+          force_orphan: true
\ No newline at end of file