-
Notifications
You must be signed in to change notification settings - Fork 0
/
DESCRIPTION
43 lines (43 loc) · 949 Bytes
/
DESCRIPTION
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
Package: ssvQC
Type: Package
Title: QC for enrichment based NGS
Version: 1.0.22
Authors@R: person("Joseph R", "Boyd", email = "[email protected]",
role = c("aut", "cre"))
Description: Peak comparison augmented with signal. Fraction of Reads in Peaks (FRIP). Strand Cross-Correlation (SCC).
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Suggests:
BiocManager,
BiocStyle,
ChIPpeakAnno,
covr,
knitr,
rmarkdown,
testthat
Depends: R (>= 3.6), ggplot2, data.table, GenomicRanges
Imports:
BiocFileCache,
cowplot,
digest,
GenomeInfoDb,
GenomicAlignments,
ggplotify,
grid,
IRanges,
methods,
pbapply,
pbmcapply,
pheatmap,
reshape2,
png,
RColorBrewer,
Rsamtools,
rtracklayer,
scales,
seqsetvis (>= 1.13.1),
S4Vectors,
stats
RoxygenNote: 7.3.1
biocViews: Software, ChIPSeq, MultipleComparison, Sequencing, Visualization