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Failed to create new species with new_species.pl #57

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irislin886 opened this issue Oct 11, 2024 · 0 comments
Open

Failed to create new species with new_species.pl #57

irislin886 opened this issue Oct 11, 2024 · 0 comments

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@irislin886
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irislin886 commented Oct 11, 2024 •
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Hi, I am trying to run Galba with singularity, however, I got an error message
"ERROR in file /opt/GALBA/scripts/galba.pl at line 3999
Failed to create new species with new_species.pl, check write permissions in /opt/Augustus/config//species directory! Command was /usr/bin/perl /opt/Augustus/scripts/new_species.pl --species=testing --AUGUSTUS_CONFIG_PATH=/opt/Augustus/config/ 1

/dev/null 2>/projects/intro2gds/I2GDS2024/pep-seq/rawdata/iris/7215_refGenomes/data/test_galba/GALBA/errors/new_species.stderr"

Do you happen to know how to fix that? Thank you very much
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@irislin886