diff --git a/WDL/inputs.json b/WDL/inputs.json index ed52149..152a9a2 100644 --- a/WDL/inputs.json +++ b/WDL/inputs.json @@ -1,13 +1,13 @@ { "ichorCNA.batchSamples": [ { - "sampleName": "17-043_cfSR_1138_ULP", + "sampleName": "", "sex": "None", - "tumorBam": "/Users/pchandra/Desktop/17-043_cfSR_1138_ULP_recalibrated.bam", - "tumorBai": "/Users/pchandra/Desktop/17-043_cfSR_1138_ULP_recalibrated.bam.bai", + "tumorBam": "/path/to/tumor.bam", + "tumorBai": "/path/to/tumor.bam.bai", "normalBam": null, "normalBai": null, - "normalPanel": "/Users/pchandra/Desktop/HD_ULP_PoN_hg38_1Mb_normAutosomes_median.rds", + "normalPanel": "/path/to/HD_ULP_PoN_hg38_1Mb_normAutosomes_median.rds", "genomeBuild": "hg38", "genomeStyle": "UCSC" }