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Incorporating code from outside repositories

Examples:

  1. Adding an external repository

    git subtree add --prefix code/Strain-Level_Metagenome_Analysis https://github.com/TealFurnholm/Strain-Level_Metagenome_Analysis.git master --squash

  2. Updating an external repository

    git subtree pull --prefix code/Strain-Level_Metagenome_Analysis https://github.com/TealFurnholm/Strain-Level_Metagenome_Analysis.git master --squash

  3. List subtrees

    git subtree list --resolve