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Lecture #1

Introduction

  • welcome to BCOR 102 Ecology & Evolution

  • Professor Nick Gotelli

    Office hours MWF 3:30 - 5:00 pm in 226 Marsh Life Science

    Tuesday 2:30 pm in Davis Center Atrium, first floor

    by appointment (in person or videoconference)

    [email protected]

  • combination of lectures and labs to cover core principles of ecology and evolution

Staff Introductions

  • myself

  • Erin O’Neill Course coordinator undergraduate, MS in Biology with Professor Alison Brody interactions between blueberries, insect pollinators, fungi. Jefffords 107 by appointment

  • LO1 Tuesday 8:30 Laney Williams MS with Brody plant-fungal interactions

  • LO2 Tuesday 11:40 Illaria Coero Borga PhD with May-Collado cetacean bioacoustics, animal behavior

  • LO3 Tuesday 2:50 Kylie Finnegan MS with Lockwood evolutionary response to thermal stress in fruit flies

  • LO4 Thursday 8:30 Daniel Munteanu PhD with Helms-Cahan molecular mechanisms of gene expression and plasticity acclimation to temperature

  • LO5 Thursday 11:40 Daniel Penados PhD with Ballif signalling pathways that regulate cell proliferation

  • LO6 Thursday 2:50 George Ni PhD with Gotelli ecological modeling, data science and the spread of forest insect pests

  • LO7 Thursday 10:05 Lauren Berkley MS with Schall/Martinsen vector borne pathogens and effects on deer, moose, and reindeer

  • LO8 Thursday 1:15 Jacob Sorrentino MS with Helms-Cahan urbanization and habitat fragmentation effects on population genetics of ants

  • Emma Hoza-Frederick undergraduate from last year’s course. Tutoring Center is a Supplemental Instructor.

  • Emmy (no feeding, no other animals)

  • me and Emma (lecture questions), TA (lab questions), Erin (scheduling questions)

Course Materials

  • Textbook A Primer of Ecology
  • course notes (second half of course)
  • lab manual - on Blackboard
  • your own lecture notes

Lecture Structure

  • begin with music (Allman Brothers)
  • no powerpoint or videos
  • writing on a notepad
  • ask questions - a key ingredient for good science!
  • could deviate from lecture schedule
  • office hours right after class and on Tuesdays (explain structure)

Lab Structure

  • each lab starts with a quz - no makeups or late quizzes be on time
  • initial presentation by lead TA
  • lab exercise
  • assignments due as listed must be before that next lab starts (usually 1 or 2 weeks in advance)
  • using R as a language

Exam Structure

  • 4 midterm exams through semester

  • each exam mix of short answers, problems, definitions

  • 100 points, 4 pages in length, last page has 8 definitions, each worth 3 points. no letter grades, just the points

  • see posted previous exams - new answer key provided this year

  • each midterm covvers material since last midterm

  • straightford structure, but accuracy in answers for full credit

  • closed book, must know your stuff and how to use your calculator

  • hand graded by me and the TAs together

  • grade challenges in person - bring to office hours or set up meeting

  • Exam I Monday September 19

    Exam II Friday October 7

    Exam III Monday October 31

    Exam IV Wednesday November 16

  • lowest midterm exam score will be dropped

  • no make up exams. Access students must make arrangements ahead of time, not retroactively.

  • no make up exams for athletic events

  • end of course and final exam

  • Final Review Session Thursday December 8 6-9 pm

    Last Day of Class Friday December 9

    Final Eam Monday December 12 1:30 - 4:15 pm

  • final exam same length and structure as midterms

  • final exam cumulative covers entire course, (Exams 1 - 4) plus material since Exam 4

  • final exam cannot be dropped or rescheduled

Grade Assignments

Midterms = 300 points

Final Exam = 100 points

Lab Assignments = 150 points

Total = 550 points

  • traditional grade assignments based on your percentage of the total 550 points
  • A 90 - 100, B = 80 - 89, C = 70 - 79, etc.
  • no rounding of percentages 79.99% = C+ 80.00% = B-
  • these are guaranteed limits.
  • we reserve right to adjust those levels, but only to lower them. So, any adjustment will help your grade, never hurt it
  • “interior” cutpoints (A-, A, A+) based on where we see natural breaks in the distributions
  • point penalties for late lab assignments, detailed in lab

Student Behavior

  • start promptly at 2:20, so don’t show up late
  • don’t talk or be disruptive
  • don’t use phones, tablets, or computers unless they are for taking notes
  • I appreciate that I speak at a rapid clip; recording lectures for personal use is fine
  • Show same respect and courtesy to TAs that you show to me
  • zero tolerance for cheating; in 30 years, only 1 major cheating incident, which occurred during covid remote teaching. I refer you to UVM’s Code of Student Conduct for more details
  • no notes or stored formulas for exams, doing your own work, not working collectively on solo assignments, not using material inappropriately from internet.
  • in lab, closed-toe shoes, long pants, no food, no drink

How To Succeed In BCOR 102

  • attend every lecture
  • complete all assignments and tests
  • sit in the front
  • ask questions and participate in class
  • get help when you need it
  • visit office hours
  • plug into science culture
    • weekly department seminars Mondays noon 101 Stafford
    • weekly graduate student seminars Fridays noon 101 Stafford

What I will provide

  • dynamic engaging lectures (not always entertaining)
  • It is what I do and what I enjoy
  • some people say that it is the best course they have had at UVM
  • how many pre-professionals?
  • could be lost to the discipline
  • some students passionate about ecology, but not happy with the quantitative focus in this course

Course Content

  • Ecology: study of distribution (where species occur) and abundance (number of individuals)

    Ecology vs. Environmental Science

    Physics vs. Engineering

    Curiosity-based research vs. applications-based research

    • Population Ecology - what controls the number of individuals in a population of a single species in time and space?
    • Community Ecology - what conttrols the number of species in time and space?

    Evolution: the study of changes in the allele frequencies of a population through time

    • Microevolution - mechanisms that cause short-term changes in allele frequencies through time (= population genetics)
    • Macroevolution - long-term consequences of microevolution
      • speciation
      • sexual reproduction
      • altruism

What Is Science

  • repeatable
  • falsifiable
  • parsimonious
  • confirmation from independent sources of data
  • consilience (concordance and convergence with existing knowledge)