From 777b994ae8489b4a7839db29de99994394823fc7 Mon Sep 17 00:00:00 2001
From: Carissa Gervasi <109082559+CarissaGervasi-NOAA@users.noreply.github.com>
Date: Fri, 14 Jun 2024 08:45:22 -0400
Subject: [PATCH] Update README.md

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 1e28d05..62a2a2e 100644
--- a/README.md
+++ b/README.md
@@ -3,7 +3,7 @@ This repository houses data, code, documentation, and report files for the Carib
 The list of indicators included in the 2024 ESR can be found in this [table](https://docs.google.com/spreadsheets/d/1WZtclTkyLzTAARKTIa69AiEVWsXMuG2K/edit?usp=sharing&ouid=103178636955659669576&rtpof=true&sd=true). This table also includes information about data sources, indicator status, and automation level. Eventually all of this information will be migrated to an indicator [catalog](https://github.com/Gulf-IEA/ESR-indicator-catalog.git). The catalog is still a work in progress.
 
 There are several folders in this repository.
-1. indicator_data --> houses all the non-confidential data needed to create each indicator. Confidential data are stored elsewhere.
+1. indicator_data --> houses all the non-confidential data needed to create each indicator. Confidential data are stored elsewhere. Scripts with confidential data (mainly fisheries-dependent indicators) will not run without access to the data files.
 2. indicator_processing --> houses all the code (R scripts) for creating each indicator. The CalculateAllIndicators.R file runs all of the R scripts for all indicators. This should be run anytime the report needs to be updated. 
 3. indicator_objects --> houses all of the .RData outputs from the R scripts used to create each indicator. These are tables all in a standardized format with each indicator variable and a time column. This folder also contains the PlotAllIndicators.R file, which creates all of the plots for the ESR and saves them to the indicator_plots folder. This script is a work in process, it does not yet run.
 4. indicator_plots --> houses all the output plots from the PlotAllIndicators.R script as well as any additional plots that are created separately to be used in the report.