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Install Quarto

Please see here: https://quarto.org/

Install the webr extension for Quarto

Run

quarto add coatless/quarto-webr

[See here for more on this](<https://github.com/coatless/quarto-webr).

To make webpage updates

Update your local codebase

git pull

Edit

Add new files or edit existing ones.

Render

To build the website, run

quarto render

in the top-level directory of this repository. A directory of "static" HTML files will be created in the _site folder.

Upload to EMBL's webserver

Run

./upload-rsync.sh

This uploads the directory to the EMBL NFS file systems. It will take a few more minutes before the changes are visible on https://www.huber.embl.de/group/ since these files will need to be further copied to an S3 bucket that serves the EMBL webserver, which is done by a demon. (I am not quite sure about this process.)

Update the codebase in git

Use git add, git commit, and finally git push.