From 6cf5fd82ea06285aa70f8211fba46e500931f01f Mon Sep 17 00:00:00 2001 From: Saman Ehsan Date: Thu, 2 May 2019 11:26:09 -0400 Subject: [PATCH] Update metadata-api version (#141) * Update metadata-api version * Update pipeline-tools version --- adapter_pipelines/Optimus/adapter.wdl | 2 +- adapter_pipelines/cellranger/adapter.wdl | 2 +- adapter_pipelines/ss2_single_sample/adapter.wdl | 2 +- requirements.txt | 2 +- setup.py | 2 +- 5 files changed, 5 insertions(+), 5 deletions(-) diff --git a/adapter_pipelines/Optimus/adapter.wdl b/adapter_pipelines/Optimus/adapter.wdl index 65d87117..f175d29f 100644 --- a/adapter_pipelines/Optimus/adapter.wdl +++ b/adapter_pipelines/Optimus/adapter.wdl @@ -139,7 +139,7 @@ workflow AdapterOptimus { Int max_cromwell_retries = 0 Boolean add_md5s = false - String pipeline_tools_version = "v0.49.0" + String pipeline_tools_version = "v0.49.1" call GetInputs as prep { input: diff --git a/adapter_pipelines/cellranger/adapter.wdl b/adapter_pipelines/cellranger/adapter.wdl index 1431556b..c5e01c2c 100644 --- a/adapter_pipelines/cellranger/adapter.wdl +++ b/adapter_pipelines/cellranger/adapter.wdl @@ -150,7 +150,7 @@ workflow Adapter10xCount { Int max_cromwell_retries = 0 Boolean add_md5s = false - String pipeline_tools_version = "v0.49.0" + String pipeline_tools_version = "v0.49.1" call GetInputs { input: diff --git a/adapter_pipelines/ss2_single_sample/adapter.wdl b/adapter_pipelines/ss2_single_sample/adapter.wdl index e9ec2403..8fbcf0cb 100644 --- a/adapter_pipelines/ss2_single_sample/adapter.wdl +++ b/adapter_pipelines/ss2_single_sample/adapter.wdl @@ -82,7 +82,7 @@ workflow AdapterSmartSeq2SingleCell{ Int max_cromwell_retries = 0 Boolean add_md5s = false - String pipeline_tools_version = "v0.49.0" + String pipeline_tools_version = "v0.49.1" call GetInputs as prep { input: diff --git a/requirements.txt b/requirements.txt index 1982a2a5..2ac58e01 100644 --- a/requirements.txt +++ b/requirements.txt @@ -4,4 +4,4 @@ google-auth>=1.6.1,<2 google-cloud-storage>=1.10.0,<2 tenacity==4.10.0 PyJWT==1.6.4 -git+git://github.com/HumanCellAtlas/metadata-api@release/1.0b4#egg=hca-metadata-api[dss] +git+git://github.com/HumanCellAtlas/metadata-api@release/1.0b15#egg=hca-metadata-api[dss] diff --git a/setup.py b/setup.py index bbb98748..25fd53ae 100644 --- a/setup.py +++ b/setup.py @@ -25,7 +25,7 @@ 'setuptools_scm>=2.0.0,<3', 'tenacity>=4.10.0,<5', 'PyJWT==1.6.4', - 'hca-metadata-api @ git+git://github.com/HumanCellAtlas/metadata-api@release/1.0b4' + 'hca-metadata-api @ git+git://github.com/HumanCellAtlas/metadata-api@release/1.0b15' ], entry_points={ 'console_scripts': [