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Releases: HumanCellAtlas/pipeline-tools

v0.46.0

01 Feb 15:09
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  • Use the default application credentials of the VM when requesting metadata from Cromwell instead of storing the JSON key in a private docker image

v0.45.0

30 Jan 18:38
03f681d
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  • Use JWT created from CaaS service account for authentication to Ingest API

v0.44.0

23 Jan 01:52
5f5b811
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  • Use HTTPS for all of the Ingest API endpoints.
  • Let the Adapter SmartSeq2 WDL accept optional output, e.g. the Zarr output.

v0.43.2

11 Jan 20:58
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  • By default use Google PAPIv2 API for all of the adapter workflows.

v0.43.1

09 Jan 15:54
1bfdc39
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  • Update hca-cli version

v0.43.0

07 Dec 19:09
4fa6013
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  • Get expected cell count from 10x bundles instead of using a static value in the cellranger adapter WDL
  • Update the pull-request-template

v0.42.1

14 Nov 21:26
62eb6f2
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  • Update version of HCA CLI to use at least version 4.4.9 as a security precaution

v0.42.0

30 Oct 16:56
ac2ac44
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  • Pass max_retries parameter to CellRanger workflow

v0.41.0

30 Oct 13:56
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  • Fix a bug that prevents production workflows from submitting results back to Ingest.
  • Upgrade the requests library to fix the security vulnerability

v0.40.0

26 Oct 23:33
1708dc7
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  • Update the cromwell-metadata docker tags used in submit WDL
  • Plug in the monitor script for cellranger Adapter workflow.