tower.yml

reports:
    "QC/multiqc_pretrim_report.html":
        display: "MultiQC pre-trimming report"
    "QC/fastq/**_1_pretrim_fastqc.zip":
        display: "FastQC report before trimming for val 1"
    "QC/fastq/**_2_pretrim_fastqc.zip":
        display: "FastQC report before trimming for val 2"
    "QC/adapter_trimming/**.fastq.gz_trimming_report.txt":
        display: "Adapter trimming report"
    "QC/multiqc_posttrim_report.html":
        display: "MultiQC post-trimming report"
    "QC/adapter_trimming/**_val_1_fastqc.zip":
        display: "FastQC report after trimming for val 1"
    "QC/adapter_trimming/**_val_2_fastqc.zip":
        display: "FastQC report after trimming for val 2"
    "BAM/STAR.**.SJ.out.tab":
        display: "STAR junction report"
        mimeType: text/tsv
    "BAM/STAR.**.Chimeric.SJ.out.junction":
        display: "STAR chimeric junction report"
        mimeType: text        
    "QC/bam/**readdist.txt":
        display: "RESeQC readdist file"
    "QC/bam/**_clipping.clipping_profile.R1.pdf":
        display: "RESeQC clipping profile R1"
    "QC/bam/**_clipping.clipping_profile.R2.pdf":
        display: "RESeQC clipping profile R2"
    "QC/bam/**_jun_saturation.junctionSaturation_plot.pdf":
        display: "RESeQC Junction saturation plot"
    "counts/*_count.txt":
        display: "Count table"