cicd_full.yml

name: cicd_full

on:
  # Run tests for pull-requests on master
  pull_request:
    branches:
      - master
  # Also run when the pull request merges  (which generates a push)
  # So that we can tag the docker image appropriately.
  push:
    branches:
      - dev

env:
  IMAGE_NAME:  ${{ github.repository }}
  REGISTRY: ghcr.io
  TEST_TAG:  ${{ github.repository }}:test

jobs:
  deploy_docker:
    runs-on: ubuntu-latest

    permissions:
      packages: write

    steps:
    - name: Checkout branch
      uses: actions/checkout@v4

    - name: Build the Docker image
      id: build
      uses: docker/build-push-action@v5
      with:
        load: true
        tags: ${{ env.TEST_TAG }}

    # run the test on the docker image
    - name: Run tests in docker image
      run: >
        docker run
        --ipc=host
        ${{ env.TEST_TAG }}
        python -m pytest ./test -s --log-cli-level DEBUG

  test_local:
    runs-on: ubuntu-latest
    permissions:
      contents: read
      packages: write

    steps:
      - name: Checkout branch
        uses: actions/checkout@v3

      # See https://github.com/marketplace/actions/setup-micromamba
      - name: setup-micromamba
        uses: mamba-org/setup-micromamba@v1.9.0
        with:
          micromamba-version: '1.5.8-0'  # temporary fix as setup-mircomamba hangs with later mamba version
          environment-file: environment.yml
          environment-name: pdaltools  # activate the environment
          cache-environment: true
          cache-downloads: true
          generate-run-shell: true

      - name: Run tests with pytest
        shell: micromamba-shell {0}
        run: python -m pytest ./test -s --log-cli-level DEBUG